Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22425 and RPSI07_RS22430 are separated by 139 nucleotidesRPSI07_RS22430 and RPSI07_RS22435 are separated by 210 nucleotidesRPSI07_RS22435 and RPSI07_RS22440 are separated by 40 nucleotidesRPSI07_RS22440 and RPSI07_RS22445 overlap by 32 nucleotides RPSI07_RS22425: RPSI07_RS22425 - bacterioferritin, at 3,188,589 to 3,189,068 _RS22425 RPSI07_RS22430: RPSI07_RS22430 - (2Fe-2S)-binding protein, at 3,189,208 to 3,189,483 _RS22430 RPSI07_RS22435: RPSI07_RS22435 - phosphoenolpyruvate--protein phosphotransferase, at 3,189,694 to 3,191,454 _RS22435 RPSI07_RS22440: RPSI07_RS22440 - HPr family phosphocarrier protein, at 3,191,495 to 3,191,764 _RS22440 RPSI07_RS22445: RPSI07_RS22445 - PTS fructose transporter subunit IIA, at 3,191,733 to 3,192,188 _RS22445
Group Condition RPSI07_RS22425 RPSI07_RS22430 RPSI07_RS22435 RPSI07_RS22440 RPSI07_RS22445
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.5 +1.1 N.D. -4.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.0 +0.8 N.D. -4.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.0 +0.9 N.D. -3.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -0.3 -0.3 N.D. -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +1.7 N.D. -4.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -1.5 +0.5 N.D. -2.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.0 -0.7 -3.6 N.D. +1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.1 +1.6 N.D. -4.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.1 +1.0 N.D. -3.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.4 -0.4 +0.4 N.D. -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.9 +0.9 N.D. -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.2 +1.4 N.D. -3.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 +0.1 +1.0 N.D. -2.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.5 -0.5 +0.5 N.D. -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.3 -1.0 +0.6 N.D. -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.3 -0.7 +0.7 N.D. -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.0 +1.6 N.D. -3.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.2 -2.4 N.D. +1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 +1.0 N.D. -1.9
m63_quarter_strength M63_quarter_strength -0.4 -0.7 +2.3 N.D. -2.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -1.6 +2.1 N.D. -1.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -0.4 +1.4 N.D. -1.9
m63_quarter_strength M63_quarter_strength -0.3 -0.6 +1.9 N.D. -1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 -0.0 -3.2 N.D. +2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +1.5 +1.7 N.D. -3.7
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.2 +1.6 N.D. -2.3
smsa no antibiotic control SMSA no antibiotic control -0.2 +0.3 +1.2 N.D. -1.3
m63_quarter_strength M63_quarter_strength -0.0 -0.7 +3.0 N.D. -2.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 +1.7 +1.6 N.D. -2.3
stress SMSA with Ralstonia_antibiotic_mix -0.4 +2.0 +0.4 N.D. -0.8
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RPSI07_RS22425
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RPSI07_RS22430
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RPSI07_RS22440
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RPSI07_RS22445
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