Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22295 and RPSI07_RS22300 are separated by 225 nucleotidesRPSI07_RS22300 and RPSI07_RS22305 are separated by 208 nucleotidesRPSI07_RS22305 and RPSI07_RS22310 are separated by 63 nucleotidesRPSI07_RS22310 and RPSI07_RS22315 are separated by 70 nucleotides RPSI07_RS22295: RPSI07_RS22295 - OsmC family peroxiredoxin, at 3,165,267 to 3,165,671 _RS22295 RPSI07_RS22300: RPSI07_RS22300 - GGDEF domain-containing protein, at 3,165,897 to 3,168,821 _RS22300 RPSI07_RS22305: RPSI07_RS22305 - RNA polymerase sigma factor RpoH, at 3,169,030 to 3,169,950 _RS22305 RPSI07_RS22310: RPSI07_RS22310 - SCO family protein, at 3,170,014 to 3,170,616 _RS22310 RPSI07_RS22315: RPSI07_RS22315 - protoheme IX farnesyltransferase, at 3,170,687 to 3,171,619 _RS22315
Group Condition RPSI07_RS22295 RPSI07_RS22300 RPSI07_RS22305 RPSI07_RS22310 RPSI07_RS22315
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.0 N.D. -1.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 N.D. -1.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.2 N.D. -1.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 +0.1 N.D. -1.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.3 N.D. -1.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.0 N.D. -1.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.1 N.D. -1.3 N.D.
cpg CPG -0.8 +0.0 N.D. -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 N.D. -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 +0.1 N.D. -0.7 N.D.
cpg CPG -0.9 +0.2 N.D. -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.3 -0.1 N.D. -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.3 N.D. -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.0 N.D. -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 -0.2 N.D. -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 -0.0 N.D. -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.3 -0.0 N.D. -0.5 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.1 N.D. -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.4 -0.0 N.D. -0.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.0 N.D. -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.0 N.D. -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.3 +0.0 N.D. -0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 +0.1 N.D. -0.7 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.0 +0.1 N.D. -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 +0.1 N.D. -0.5 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.3 N.D. -0.5 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.2 N.D. -0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 +0.2 N.D. -0.5 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.1 N.D. -0.3 N.D.
m63_quarter_strength M63_quarter_strength +0.6 -0.1 N.D. -0.1 N.D.
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RPSI07_RS22295
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RPSI07_RS22300
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RPSI07_RS22310
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RPSI07_RS22315
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