Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS22225 and RPSI07_RS22230 are separated by 195 nucleotidesRPSI07_RS22230 and RPSI07_RS22235 are separated by 79 nucleotidesRPSI07_RS22235 and RPSI07_RS22240 overlap by 1 nucleotidesRPSI07_RS22240 and RPSI07_RS22245 are separated by 60 nucleotides RPSI07_RS22225: RPSI07_RS22225 - phosphopantetheine adenylyltransferase, at 3,151,836 to 3,152,342 _RS22225 RPSI07_RS22230: RPSI07_RS22230 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 3,152,538 to 3,153,185 _RS22230 RPSI07_RS22235: RPSI07_RS22235 - insulinase family protein, at 3,153,265 to 3,154,608 _RS22235 RPSI07_RS22240: RPSI07_RS22240 - insulinase family protein, at 3,154,608 to 3,156,101 _RS22240 RPSI07_RS22245: RPSI07_RS22245 - signal recognition particle-docking protein FtsY, at 3,156,162 to 3,157,289 _RS22245
Group Condition RPSI07_RS22225 RPSI07_RS22230 RPSI07_RS22235 RPSI07_RS22240 RPSI07_RS22245
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.1 -0.7 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.4 -0.9 -1.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.1 -0.7 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.1 -0.8 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.4 -0.6 -1.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.3 -0.6 -1.2 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.9 -1.0 -1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.3 -0.8 -0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.6 +0.2 +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 +0.3 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.4 -0.6 -0.8 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.6 -0.6 +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 +0.2 +0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.9 +0.3 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.6 -0.6 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.9 -0.7 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.7 +0.4 +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -0.3 +0.5 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.5 +0.4 +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.5 +0.8 +0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.1 +0.8 +1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.1 +1.0 +1.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.2 +0.8 +1.1 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.2 +0.8 +1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.0 +1.0 +1.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.3 +0.8 +1.2 N.D.
cpg no stress control CPG no stress control N.D. +0.8 +0.8 +0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.6 +0.9 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.6 +0.9 +1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.9 +0.9 +1.1 N.D.
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