Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS21795 and RPSI07_RS21800 are separated by 66 nucleotidesRPSI07_RS21800 and RPSI07_RS21805 are separated by 84 nucleotidesRPSI07_RS21805 and RPSI07_RS21810 are separated by 139 nucleotidesRPSI07_RS21810 and RPSI07_RS21815 are separated by 28 nucleotides RPSI07_RS21795: RPSI07_RS21795 - DedA family protein, at 3,052,513 to 3,053,094 _RS21795 RPSI07_RS21800: RPSI07_RS21800 - membrane protein, at 3,053,161 to 3,054,408 _RS21800 RPSI07_RS21805: RPSI07_RS21805 - potassium channel protein, at 3,054,493 to 3,055,416 _RS21805 RPSI07_RS21810: RPSI07_RS21810 - threonine ammonia-lyase, biosynthetic, at 3,055,556 to 3,057,079 _RS21810 RPSI07_RS21815: RPSI07_RS21815 - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, at 3,057,108 to 3,057,941 _RS21815
Group Condition RPSI07_RS21795 RPSI07_RS21800 RPSI07_RS21805 RPSI07_RS21810 RPSI07_RS21815
m63_quarter_strength M63_quarter_strength -0.3 -0.2 -0.0 -2.0 -2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -1.3 -0.0 -1.8 -1.1
m63_quarter_strength M63_quarter_strength -0.5 +0.1 -0.0 -3.2 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.4 -0.1 -1.3 -2.1
m63_quarter_strength M63_quarter_strength -0.3 -0.0 -0.1 -2.7 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.6 +0.2 -2.9 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.4 +0.1 -2.2 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 -0.0 -1.4 -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.7 +0.1 -1.5 -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 +0.2 -1.9 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.7 -0.1 -1.6 -1.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.3 +0.0 -0.6 -2.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.2 +0.1 -1.6 -1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 -0.5 -0.1 -0.8 -1.3
smsa no antibiotic control SMSA no antibiotic control -0.5 -0.1 +0.0 -0.3 -1.9
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.5 -0.2 -0.6 -1.6
stress SMSA with Ralstonia_antibiotic_mix -0.1 -0.1 +0.0 -0.1 -2.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.1 +0.1 -0.5 -1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.6 +0.4 -1.8 -1.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 +0.2 +0.2 -0.6 -1.8
cpg CPG -0.5 -0.1 -0.4 -0.1 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 -0.3 -0.3 -0.3 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 +0.0 +0.1 +0.0 -2.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 -0.3 +0.0 +0.1 -1.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.0 +0.2 -0.7 -1.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 +0.2 +0.1 -0.8 -1.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.4 +0.3 -0.0 +0.1 -1.8
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.5 +0.3 -0.4 -1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.3 +0.2 -0.6 -1.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.5 -0.5 +0.1 -0.2 -1.1
remove
RPSI07_RS21795
plot		 remove
RPSI07_RS21800
plot		 remove
RPSI07_RS21805		 remove
RPSI07_RS21810
plot		 remove
RPSI07_RS21815
plot