Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS21575 and RPSI07_RS21580 overlap by 4 nucleotidesRPSI07_RS21580 and RPSI07_RS21585 are separated by 176 nucleotidesRPSI07_RS21585 and RPSI07_RS21590 are separated by 64 nucleotidesRPSI07_RS21590 and RPSI07_RS21595 are separated by 128 nucleotides RPSI07_RS21575: RPSI07_RS21575 - D-tyrosyl-tRNA(Tyr) deacylase, at 3,002,071 to 3,002,571 _RS21575 RPSI07_RS21580: RPSI07_RS21580 - tyrosine--tRNA ligase, at 3,002,568 to 3,003,839 _RS21580 RPSI07_RS21585: RPSI07_RS21585 - anhydro-N-acetylmuramic acid kinase, at 3,004,016 to 3,005,176 _RS21585 RPSI07_RS21590: RPSI07_RS21590 - iron-sulfur cluster insertion protein ErpA, at 3,005,241 to 3,005,615 _RS21590 RPSI07_RS21595: RPSI07_RS21595 - membrane protein, at 3,005,744 to 3,006,148 _RS21595
Group Condition RPSI07_RS21575 RPSI07_RS21580 RPSI07_RS21585 RPSI07_RS21590 RPSI07_RS21595
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.1 N.D. -0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -1.1 N.D. -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.0 N.D. -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.8 N.D. -0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.1 N.D. -0.2 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control -0.9 N.D. -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. -0.5 N.D. N.D.
m63_quarter_strength M63_quarter_strength -0.6 N.D. -0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 N.D. -0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.7 N.D. -0.4 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. -0.5 N.D. N.D.
cpg no stress control CPG no stress control -0.5 N.D. -0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 N.D. -0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.7 N.D. -0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. -0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.6 N.D. -0.1 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 N.D. +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.7 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.6 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.6 N.D. +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.6 N.D. +0.6 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.4 N.D. +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 N.D. -0.1 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 N.D. +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 N.D. +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 N.D. +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 N.D. +0.2 N.D. N.D.
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RPSI07_RS21575
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RPSI07_RS21580
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RPSI07_RS21595
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