Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS21455 and RPSI07_RS21460 overlap by 14 nucleotidesRPSI07_RS21460 and RPSI07_RS21465 are separated by 30 nucleotidesRPSI07_RS21465 and RPSI07_RS21470 are separated by 99 nucleotidesRPSI07_RS21470 and RPSI07_RS21475 are separated by 2 nucleotides RPSI07_RS21455: RPSI07_RS21455 - EamA/RhaT family transporter, at 2,975,145 to 2,976,050 _RS21455 RPSI07_RS21460: RPSI07_RS21460 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 2,976,037 to 2,976,882 _RS21460 RPSI07_RS21465: RPSI07_RS21465 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 2,976,913 to 2,977,929 _RS21465 RPSI07_RS21470: RPSI07_RS21470 - molecular chaperone SurA, at 2,978,029 to 2,979,519 _RS21470 RPSI07_RS21475: RPSI07_RS21475 - LPS-assembly protein LptD, at 2,979,522 to 2,981,957 _RS21475
Group Condition RPSI07_RS21455 RPSI07_RS21460 RPSI07_RS21465 RPSI07_RS21470 RPSI07_RS21475
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -2.6 N.D. N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control -1.0 -1.5 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.9 -1.6 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -2.6 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.1 -0.8 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -2.0 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.8 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -1.9 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -1.6 N.D. N.D. N.D.
cpg no stress control CPG no stress control -1.0 -0.5 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.4 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -1.3 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength -1.3 -0.2 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.1 -0.3 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.3 -1.1 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -1.8 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 -1.9 N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 -1.3 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -1.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.3 +0.4 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.9 -1.3 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 -0.9 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 -0.8 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.8 -0.9 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.9 +1.5 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.2 -0.5 N.D. N.D. N.D.
cpg CPG +0.2 +1.2 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 +2.0 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength +1.2 +0.7 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 +1.4 N.D. N.D. N.D.
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RPSI07_RS21455
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RPSI07_RS21475
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