Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS21390 and RPSI07_RS25235 are separated by 390 nucleotidesRPSI07_RS25235 and RPSI07_RS21410 are separated by 188 nucleotidesRPSI07_RS21410 and RPSI07_RS21415 are separated by 79 nucleotidesRPSI07_RS21415 and RPSI07_RS21420 are separated by 154 nucleotides RPSI07_RS21390: RPSI07_RS21390 - rRNA maturation RNase YbeY, at 2,963,223 to 2,963,990 _RS21390 RPSI07_RS25235: RPSI07_RS25235 - hypothetical protein, at 2,964,381 to 2,965,709 _RS25235 RPSI07_RS21410: RPSI07_RS21410 - HlyC/CorC family transporter, at 2,965,898 to 2,966,794 _RS21410 RPSI07_RS21415: RPSI07_RS21415 - apolipoprotein N-acyltransferase, at 2,966,874 to 2,968,385 _RS21415 RPSI07_RS21420: RPSI07_RS21420 - glycine--tRNA ligase subunit alpha, at 2,968,540 to 2,969,517 _RS21420
Group Condition RPSI07_RS21390 RPSI07_RS25235 RPSI07_RS21410 RPSI07_RS21415 RPSI07_RS21420
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.9 -0.4 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.0 -0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.4 +0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 -0.6 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.3 -0.7 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.2 -0.6 N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. +0.3 -0.6 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -0.6 +0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.4 -0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.4 +0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.6 -0.6 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.5 -0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +0.4 -0.4 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.6 +0.7 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 +0.4 N.D. N.D.
cpg no stress control CPG no stress control N.D. +0.6 -0.3 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.8 -0.4 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.1 +0.7 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +1.0 -0.4 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. +0.1 +0.7 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.2 +0.7 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.3 +0.7 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.5 +0.6 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 +0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +2.1 -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +1.0 +0.7 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.8 +1.3 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.8 +0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +3.2 +0.5 N.D. N.D.
remove
RPSI07_RS21390
plot		 remove
RPSI07_RS25235
plot		 remove
RPSI07_RS21410		 remove
RPSI07_RS21415
plot		 remove
RPSI07_RS21420
plot