Fitness for 5 genes in Ralstonia solanacearum PSI07

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RPSI07_RS21375	RPSI07_RS21380	RPSI07_RS21385	RPSI07_RS21390	RPSI07_RS25235
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	+0.1	-0.2	N.D.	-1.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.2	-1.0	N.D.	-0.2
cpg	CPG	N.D.	-0.2	-0.7	N.D.	-0.4
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.2	-0.9	N.D.	-0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	N.D.	-0.1	-0.8	N.D.	-0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.5	-0.6	N.D.	-0.1
stress	SMSA with Ralstonia_antibiotic_mix	N.D.	-0.1	-0.9	N.D.	-0.1
smsa no antibiotic control	SMSA no antibiotic control	N.D.	-0.4	-0.5	N.D.	-0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	+0.2	-1.2	N.D.	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	-0.5	-0.4	N.D.	+0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	-0.4	+0.3	N.D.	-0.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	N.D.	+0.4	-0.8	N.D.	-0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	N.D.	+0.2	-0.8	N.D.	+0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.3	+1.0	N.D.	-1.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	+0.0	+0.5	N.D.	-0.9
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	+0.3	-0.7	N.D.	+0.3
stress	SMSA with Ralstonia_antibiotic_mix	N.D.	+0.4	-0.6	N.D.	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	+0.5	-0.8	N.D.	+0.4
cpg no stress control	CPG no stress control	N.D.	+0.2	-0.7	N.D.	+0.6
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	N.D.	+0.2	-0.4	N.D.	+0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	-0.4	+0.4	N.D.	+0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	+0.3	-0.4	N.D.	+1.0
smsa no antibiotic control	SMSA no antibiotic control	N.D.	+0.3	-0.2	N.D.	+0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	-0.2	+0.4	N.D.	+1.0
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	+0.6	-0.2	N.D.	+0.8
m63_quarter_strength	M63_quarter_strength	N.D.	+0.6	+0.4	N.D.	+0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	N.D.	+0.7	+0.6	N.D.	+0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	+0.4	+0.1	N.D.	+2.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	-0.3	+0.1	N.D.	+3.2
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	N.D.	+0.4	+0.8	N.D.	+1.8