Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS21360 and RPSI07_RS21365 are separated by 200 nucleotidesRPSI07_RS21365 and RPSI07_RS21370 are separated by 117 nucleotidesRPSI07_RS21370 and RPSI07_RS21375 are separated by 90 nucleotidesRPSI07_RS21375 and RPSI07_RS21380 are separated by 63 nucleotides RPSI07_RS21360: RPSI07_RS21360 - DUF1571 domain-containing protein, at 2,957,209 to 2,958,111 _RS21360 RPSI07_RS21365: RPSI07_RS21365 - OmpW family protein, at 2,958,312 to 2,959,217 _RS21365 RPSI07_RS21370: RPSI07_RS21370 - NAD(P)/FAD-dependent oxidoreductase, at 2,959,335 to 2,960,336 _RS21370 RPSI07_RS21375: RPSI07_RS21375 - hypothetical protein, at 2,960,427 to 2,960,783 _RS21375 RPSI07_RS21380: RPSI07_RS21380 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 2,960,847 to 2,962,199 _RS21380
Group Condition RPSI07_RS21360 RPSI07_RS21365 RPSI07_RS21370 RPSI07_RS21375 RPSI07_RS21380
cpg CPG -0.3 -0.3 -1.1 N.D. -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 -0.2 -1.2 N.D. -0.4
cpg CPG -0.7 -0.2 -0.4 N.D. -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.3 -0.1 -0.6 N.D. -0.1
m63_quarter_strength M63_quarter_strength -0.2 -0.3 -0.8 N.D. +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.1 -0.4 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 +0.1 -0.6 N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.1 -1.0 N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -0.1 +0.3 N.D. -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.2 -0.7 N.D. +0.4
m63_quarter_strength M63_quarter_strength -0.1 +0.0 -0.4 N.D. +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.0 -0.1 +0.6 N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.3 +0.7 N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.2 +0.7 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.2 +0.7 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix -0.2 -0.2 +0.9 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 -0.1 -0.7 N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 -0.2 +0.6 N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 -0.4 +0.9 N.D. -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 +0.2 -0.3 N.D. +0.4
smsa no antibiotic control SMSA no antibiotic control +0.2 -0.1 +0.7 N.D. -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.0 +1.0 N.D. +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.4 +0.1 +0.5 N.D. +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.0 +0.9 N.D. +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.1 +0.7 N.D. +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.5 +0.3 N.D. +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.3 +1.0 N.D. +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +1.5 N.D. -0.3
m63_quarter_strength M63_quarter_strength +0.8 -0.3 +1.0 N.D. +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.1 +0.8 N.D. +0.6
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