Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS21260 and RPSI07_RS21265 are separated by 276 nucleotidesRPSI07_RS21265 and RPSI07_RS21270 overlap by 8 nucleotidesRPSI07_RS21270 and RPSI07_RS21275 overlap by 4 nucleotidesRPSI07_RS21275 and RPSI07_RS21280 are separated by 208 nucleotides RPSI07_RS21260: RPSI07_RS21260 - recombinase RecA, at 2,932,886 to 2,933,944 _RS21260 RPSI07_RS21265: RPSI07_RS21265 - DNA-binding response regulator, at 2,934,221 to 2,934,919 _RS21265 RPSI07_RS21270: RPSI07_RS21270 - sensor histidine kinase, at 2,934,912 to 2,936,450 _RS21270 RPSI07_RS21275: RPSI07_RS21275 - DUF4212 domain-containing protein, at 2,936,447 to 2,936,764 _RS21275 RPSI07_RS21280: RPSI07_RS21280 - MFS transporter, at 2,936,973 to 2,938,676 _RS21280
Group Condition RPSI07_RS21260 RPSI07_RS21265 RPSI07_RS21270 RPSI07_RS21275 RPSI07_RS21280
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 -0.3 -0.0 +0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 -0.1 +0.1 -0.3 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -2.6 +0.1 +0.2 -0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.3 -0.0 -0.0 -0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.4 -0.3 -0.2 -0.1 -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.3 -0.1 +0.1 +0.0 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.8 -0.0 -0.0 -0.2 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.7 -0.2 -0.0 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.1 +0.3 -0.0 -0.2 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 -0.8 +0.3 +0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -2.4 +0.2 +0.5 -0.2 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -2.3 +0.4 +0.3 -0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 -0.8 +0.2 +0.3 -0.0
stress SMSA with Ralstonia_antibiotic_mix -2.1 +0.3 +0.1 -0.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 +0.5 +0.1 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -2.4 +0.4 +0.2 +0.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.9 -0.0 -0.0 +0.2 -0.0
stress SMSA with Ralstonia_antibiotic_mix -1.8 +0.1 +0.0 +0.1 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.9 +0.2 -0.0 +0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.8 -0.0 +0.1 +0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.9 +0.4 +0.3 -0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -2.3 +0.8 +0.2 -0.0 +0.0
cpg no stress control CPG no stress control -1.8 +0.3 +0.3 +0.1 -0.0
smsa no antibiotic control SMSA no antibiotic control -1.5 +0.2 +0.2 -0.1 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -1.5 +0.2 +0.2 +0.1 +0.0
m63_quarter_strength M63_quarter_strength -1.2 +0.5 -0.1 +0.0 -0.2
m63_quarter_strength M63_quarter_strength -1.3 -0.2 -0.1 +0.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.4 +0.5 +0.0 +0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.1 -0.3 -0.1 +0.9 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +1.5 -0.2 +0.1 +0.7 -0.2
remove
RPSI07_RS21260
plot
remove
RPSI07_RS21265
plot
remove
RPSI07_RS21270
remove
RPSI07_RS21275
plot
remove
RPSI07_RS21280
plot