Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS21195 and RPSI07_RS21200 overlap by 8 nucleotidesRPSI07_RS21200 and RPSI07_RS21205 are separated by 18 nucleotidesRPSI07_RS21205 and RPSI07_RS21210 are separated by 94 nucleotidesRPSI07_RS21210 and RPSI07_RS25230 are separated by 162 nucleotides RPSI07_RS21195: RPSI07_RS21195 - alpha/beta hydrolase, at 2,919,805 to 2,920,920 _RS21195 RPSI07_RS21200: RPSI07_RS21200 - DUF2946 domain-containing protein, at 2,920,913 to 2,921,500 _RS21200 RPSI07_RS21205: RPSI07_RS21205 - peptidase M48, at 2,921,519 to 2,923,207 _RS21205 RPSI07_RS21210: RPSI07_RS21210 - cyclic pyranopterin monophosphate synthase MoaC, at 2,923,302 to 2,923,778 _RS21210 RPSI07_RS25230: RPSI07_RS25230 - hypothetical protein, at 2,923,941 to 2,924,171 _RS25230
Group Condition RPSI07_RS21195 RPSI07_RS21200 RPSI07_RS21205 RPSI07_RS21210 RPSI07_RS25230
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.9 +0.2 -0.4 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -1.5 +0.1 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.2 -0.5 -0.3 -0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.5 -0.4 -0.3 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.1 -0.2 -0.3 -0.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.2 -0.2 -0.6 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.2 -0.4 +0.3 -0.3 -0.1
m63_quarter_strength M63_quarter_strength +0.1 -0.3 -0.5 +0.5 -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 -0.2 +0.2 -0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.3 -0.2 -0.9 +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 -0.5 -0.2 +0.0 -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 +0.3 -0.5 -0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.3 +0.3 -0.4 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.1 -0.1 -0.5 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 -0.3 -0.1 +0.0 +0.6
cpg CPG +0.1 +0.5 -0.1 -0.4 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.0 -0.3 -0.6 +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.0 -0.2 -0.4 +0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.0 +1.0 -0.0 -0.1 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 +0.4 +0.2 -0.2 -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 +0.8 +0.0 -0.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.2 +1.3 -0.2 +0.2 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +0.4 +0.2 -0.0 -0.2
cpg no stress control CPG no stress control +0.2 +0.6 +0.3 -0.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 +0.4 +0.3 +0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.6 -0.4 -0.4 +0.9
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.9 +0.2 -0.2 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.2 +0.8 +0.3 -0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 +0.9 -0.1 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 +1.0 +0.1 +0.1 +0.1
remove
RPSI07_RS21195
plot
remove
RPSI07_RS21200
plot
remove
RPSI07_RS21205
remove
RPSI07_RS21210
plot
remove
RPSI07_RS25230
plot