Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS21000 and RPSI07_RS21005 are separated by 194 nucleotidesRPSI07_RS21005 and RPSI07_RS21010 are separated by 10 nucleotidesRPSI07_RS21010 and RPSI07_RS21015 are separated by 13 nucleotidesRPSI07_RS21015 and RPSI07_RS21020 are separated by 421 nucleotides RPSI07_RS21000: RPSI07_RS21000 - PLP-dependent aminotransferase family protein, at 2,877,891 to 2,879,372 _RS21000 RPSI07_RS21005: RPSI07_RS21005 - hypothetical protein, at 2,879,567 to 2,879,917 _RS21005 RPSI07_RS21010: RPSI07_RS21010 - hypothetical protein, at 2,879,928 to 2,880,134 _RS21010 RPSI07_RS21015: RPSI07_RS21015 - hypothetical protein, at 2,880,148 to 2,880,381 _RS21015 RPSI07_RS21020: RPSI07_RS21020 - hypothetical protein, at 2,880,803 to 2,881,435 _RS21020
Group Condition RPSI07_RS21000 RPSI07_RS21005 RPSI07_RS21010 RPSI07_RS21015 RPSI07_RS21020
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 N.D. N.D. N.D. -0.8
cpg no stress control CPG no stress control -0.3 N.D. N.D. N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.5 N.D. N.D. N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 N.D. N.D. N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix -0.2 N.D. N.D. N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 N.D. N.D. N.D. +0.2
smsa no antibiotic control SMSA no antibiotic control -0.0 N.D. N.D. N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 N.D. N.D. N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.4 N.D. N.D. N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 N.D. N.D. N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.3 N.D. N.D. N.D. +0.1
smsa no antibiotic control SMSA no antibiotic control -0.3 N.D. N.D. N.D. +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 N.D. N.D. N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 N.D. N.D. N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. N.D. N.D. +0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 N.D. N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.4 N.D. N.D. N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.5 N.D. N.D. N.D. -0.1
cpg CPG +0.0 N.D. N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.3 N.D. N.D. N.D. +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix -0.0 N.D. N.D. N.D. +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 N.D. N.D. N.D. +0.3
cpg no stress control CPG no stress control +0.6 N.D. N.D. N.D. -0.0
cpg CPG -0.0 N.D. N.D. N.D. +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 N.D. N.D. N.D. +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 N.D. N.D. N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 N.D. N.D. N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.6 N.D. N.D. N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.7 N.D. N.D. N.D. +0.4
remove
RPSI07_RS21000
plot		 remove
RPSI07_RS21005
plot		 remove
RPSI07_RS21010		 remove
RPSI07_RS21015
plot		 remove
RPSI07_RS21020
plot