Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS20650 and RPSI07_RS20655 are separated by 83 nucleotidesRPSI07_RS20655 and RPSI07_RS20660 are separated by 329 nucleotidesRPSI07_RS20660 and RPSI07_RS20665 are separated by 78 nucleotidesRPSI07_RS20665 and RPSI07_RS20670 are separated by 248 nucleotides RPSI07_RS20650: RPSI07_RS20650 - YqgE/AlgH family protein, at 2,803,370 to 2,803,942 _RS20650 RPSI07_RS20655: RPSI07_RS20655 - 16S rRNA pseudouridine(516) synthase, at 2,804,026 to 2,804,784 _RS20655 RPSI07_RS20660: RPSI07_RS20660 - hybrid sensor histidine kinase/response regulator, at 2,805,114 to 2,811,209 _RS20660 RPSI07_RS20665: RPSI07_RS20665 - chemotaxis protein, at 2,811,288 to 2,813,519 _RS20665 RPSI07_RS20670: RPSI07_RS20670 - chemotaxis protein CheW, at 2,813,768 to 2,814,313 _RS20670
Group Condition RPSI07_RS20650 RPSI07_RS20655 RPSI07_RS20660 RPSI07_RS20665 RPSI07_RS20670
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.7 -0.5 -0.2 -0.7 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 -0.4 +0.1 -0.4 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -0.1 +0.1 -0.3 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 +0.1 +0.0 -0.2 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.0 -0.4 -0.1 +0.1 -0.1
m63_quarter_strength M63_quarter_strength -0.5 -0.2 +0.3 -0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.8 -0.5 +0.1 +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.5 +0.5 +0.4 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 +0.2 -0.2 -0.7 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 +0.3 +0.0 -0.0 -0.1
cpg CPG -1.1 -0.2 +0.4 -0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 +0.3 +0.0 +0.7 -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.1 +0.0 -0.1 -0.1 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 +0.4 +0.0 -0.6 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.3 -0.2 -0.6 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 +0.2 +0.1 +0.3 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 -0.1 +0.6 +0.7 -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.7 +0.0 -0.1 -0.2 +0.7
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.2 +0.0 +0.6 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 +0.4 +0.3 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.2 +0.4 +0.6 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.2 +0.8 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.8 -0.1 -0.1 -0.6 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.4 -0.4 -0.2 +0.3 +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 -0.1 +0.3 +0.5 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.5 -0.4 -0.0 +0.1 +0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 -0.0 -0.1 +0.2 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.8 +0.3 +0.2 -0.5 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +1.0 +0.2 +0.2 -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +1.4 +0.1 -0.0 +0.1 +0.0
remove
RPSI07_RS20650
plot		 remove
RPSI07_RS20655
plot		 remove
RPSI07_RS20660		 remove
RPSI07_RS20665
plot		 remove
RPSI07_RS20670
plot