Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS20535 and RPSI07_RS20540 are separated by 27 nucleotidesRPSI07_RS20540 and RPSI07_RS20545 are separated by 69 nucleotidesRPSI07_RS20545 and RPSI07_RS20550 are separated by 7 nucleotidesRPSI07_RS20550 and RPSI07_RS20555 are separated by 102 nucleotides RPSI07_RS20535: RPSI07_RS20535 - protein-L-isoaspartate O-methyltransferase, at 2,781,220 to 2,781,870 _RS20535 RPSI07_RS20540: RPSI07_RS20540 - sulfurtransferase, at 2,781,898 to 2,782,230 _RS20540 RPSI07_RS20545: RPSI07_RS20545 - channel protein TolC, at 2,782,300 to 2,783,754 _RS20545 RPSI07_RS20550: RPSI07_RS20550 - META domain-containing protein, at 2,783,762 to 2,784,517 _RS20550 RPSI07_RS20555: RPSI07_RS20555 - 3-deoxy-D-manno-octulosonic acid transferase, at 2,784,620 to 2,785,936 _RS20555
Group Condition RPSI07_RS20535 RPSI07_RS20540 RPSI07_RS20545 RPSI07_RS20550 RPSI07_RS20555
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 N.D. -1.0 -1.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -2.1 -1.0 N.D.
m63_quarter_strength M63_quarter_strength -0.7 N.D. -1.1 -1.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.3 N.D. -0.5 -0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.3 N.D. -0.8 +0.4 N.D.
cpg CPG -0.9 N.D. -1.7 +0.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.6 N.D. -1.2 -0.6 N.D.
cpg CPG -0.8 N.D. -1.3 -0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.1 N.D. -0.8 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. -1.3 +0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.7 N.D. -0.9 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 N.D. -1.2 -0.6 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. -1.9 +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 N.D. -1.5 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.1 N.D. -0.4 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.6 -1.3 N.D.
smsa no antibiotic control SMSA no antibiotic control -1.0 N.D. -0.8 +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.1 N.D. -0.1 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.6 N.D. -0.9 -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 N.D. -0.4 -0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 N.D. -1.1 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 N.D. -1.7 +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.9 N.D. -0.6 +0.1 N.D.
m63_quarter_strength M63_quarter_strength -0.5 N.D. -1.1 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.6 N.D. +0.8 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.3 N.D. -1.0 +0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -1.1 +0.8 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 N.D. +0.5 +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 N.D. -0.3 +1.8 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.5 N.D. +0.7 +0.7 N.D.
remove
RPSI07_RS20535
plot		 remove
RPSI07_RS20540
plot		 remove
RPSI07_RS20545		 remove
RPSI07_RS20550
plot		 remove
RPSI07_RS20555
plot