Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS19390 and RPSI07_RS19395 are separated by 494 nucleotidesRPSI07_RS19395 and RPSI07_RS19400 are separated by 21 nucleotidesRPSI07_RS19400 and RPSI07_RS19405 overlap by 19 nucleotidesRPSI07_RS19405 and RPSI07_RS19410 are separated by 8 nucleotides RPSI07_RS19390: RPSI07_RS19390 - L-lactate permease, at 2,533,705 to 2,535,390 _RS19390 RPSI07_RS19395: RPSI07_RS19395 - multidrug ABC transporter ATP-binding protein, at 2,535,885 to 2,537,716 _RS19395 RPSI07_RS19400: RPSI07_RS19400 - chromate transporter, at 2,537,738 to 2,538,283 _RS19400 RPSI07_RS19405: RPSI07_RS19405 - chromate transporter, at 2,538,265 to 2,538,846 _RS19405 RPSI07_RS19410: RPSI07_RS19410 - DNA topoisomerase IV subunit A, at 2,538,855 to 2,541,200 _RS19410
Group Condition RPSI07_RS19390 RPSI07_RS19395 RPSI07_RS19400 RPSI07_RS19405 RPSI07_RS19410
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.1 +0.1 -0.3 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.0 -0.3 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 +0.1 -0.5 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.3 +0.1 -0.5 -0.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 +0.1 -0.7 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.5 +0.0 -0.4 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.2 +0.1 -0.4 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 -0.1 -0.6 +0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.4 -0.3 -0.5 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.8 +0.0 +0.6 +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.4 +0.1 -0.3 +0.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 -0.1 -0.6 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.0 -0.5 +0.5 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.0 -0.2 +0.7 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 -0.0 -0.0 +0.7 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.0 -0.1 -0.3 +0.9 N.D.
m63_quarter_strength M63_quarter_strength +0.5 +0.2 +0.3 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.5 -0.2 -1.0 +0.4 N.D.
smsa no antibiotic control SMSA no antibiotic control +0.7 +0.2 +0.2 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.8 +0.0 -0.1 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.5 -0.0 +0.5 +0.9 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 +0.0 -0.1 +1.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +2.0 -0.3 +0.3 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 -0.1 +0.5 +0.3 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.1 +0.4 +0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.2 -0.1 -0.0 +1.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 -0.1 +0.1 +1.2 N.D.
m63_quarter_strength M63_quarter_strength +0.1 +0.1 +0.4 +0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.5 -0.2 -0.7 +1.1 N.D.
smsa no antibiotic control SMSA no antibiotic control +1.9 +0.1 -0.1 +0.5 N.D.
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