Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS19215 and RPSI07_RS19220 overlap by 11 nucleotidesRPSI07_RS19220 and RPSI07_RS19225 are separated by 19 nucleotidesRPSI07_RS19225 and RPSI07_RS19230 are separated by 36 nucleotidesRPSI07_RS19230 and RPSI07_RS19235 are separated by 19 nucleotides RPSI07_RS19215: RPSI07_RS19215 - sugar ABC transporter ATP-binding protein, at 2,494,350 to 2,495,921 _RS19215 RPSI07_RS19220: RPSI07_RS19220 - ABC transporter permease, at 2,495,911 to 2,496,957 _RS19220 RPSI07_RS19225: RPSI07_RS19225 - LacI family transcriptional regulator, at 2,496,977 to 2,498,020 _RS19225 RPSI07_RS19230: RPSI07_RS19230 - ribokinase, at 2,498,057 to 2,499,004 _RS19230 RPSI07_RS19235: RPSI07_RS19235 - recombinase, at 2,499,024 to 2,501,123 _RS19235
Group Condition RPSI07_RS19215 RPSI07_RS19220 RPSI07_RS19225 RPSI07_RS19230 RPSI07_RS19235
stress SMSA with Ralstonia_antibiotic_mix +0.8 +0.6 -0.2 -1.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +1.1 +0.6 -0.4 -1.0 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +1.0 +0.5 -0.1 -1.1 -0.1
smsa no antibiotic control SMSA no antibiotic control +1.0 +0.8 -0.3 -1.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.2 +0.5 -0.3 -1.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +1.2 +0.5 +0.2 -1.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.2 +0.7 +0.1 -0.9 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.2 +0.8 -0.3 -0.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.4 +1.7 -1.5 +0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.2 +1.6 -0.7 -0.5 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.4 +1.6 -1.0 -0.2 -0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.2 +1.8 -0.4 -0.4 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.7 +2.3 -1.6 -0.0 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.9 +1.1 -0.3 +0.2 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.9 +0.8 -0.4 +0.8 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.5 +2.0 -0.8 -0.3 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.9 +0.8 -0.4 +1.0 +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 +1.9 -0.2 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.2 +1.7 -0.2 +0.6 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +2.8 +2.4 -0.7 -1.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +1.3 +1.2 -0.2 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.7 +2.2 -1.2 +1.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +1.4 +0.8 +0.2 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.2 +1.8 +0.2 +0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +2.1 +2.3 -0.2 -0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.8 +2.7 -1.3 +1.3 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.7 +2.6 -1.2 +1.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.7 +2.1 -0.3 +1.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +2.1 +2.4 +0.2 -0.0 +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.5 +3.2 -0.6 +1.1 +0.3
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RPSI07_RS19215
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RPSI07_RS19220
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RPSI07_RS19230
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RPSI07_RS19235
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