Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS18900 and RPSI07_RS18905 overlap by 32 nucleotidesRPSI07_RS18905 and RPSI07_RS18910 overlap by 17 nucleotidesRPSI07_RS18910 and RPSI07_RS18915 are separated by 606 nucleotidesRPSI07_RS18915 and RPSI07_RS18920 are separated by 90 nucleotides RPSI07_RS18900: RPSI07_RS18900 - CHASE2 domain-containing protein, at 2,433,503 to 2,435,857 _RS18900 RPSI07_RS18905: RPSI07_RS18905 - LysM peptidoglycan-binding domain-containing protein, at 2,435,826 to 2,437,532 _RS18905 RPSI07_RS18910: RPSI07_RS18910 - DNA-binding response regulator, at 2,437,516 to 2,438,229 _RS18910 RPSI07_RS18915: RPSI07_RS18915 - tRNA-Cys, at 2,438,836 to 2,438,909 _RS18915 RPSI07_RS18920: RPSI07_RS18920 - tRNA-Gly, at 2,439,000 to 2,439,075 _RS18920
Group Condition RPSI07_RS18900 RPSI07_RS18905 RPSI07_RS18910 RPSI07_RS18915 RPSI07_RS18920
m63_quarter_strength M63_quarter_strength -1.1 -0.3 +0.3 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.7 -0.3 -0.1 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 -0.2 -0.1 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 +0.0 -0.3 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 +0.3 -0.3 N.D. N.D.
m63_quarter_strength M63_quarter_strength -0.7 +0.3 -0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 -0.2 +0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.5 -0.2 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.2 +0.2 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.6 +0.1 N.D. N.D.
m63_quarter_strength M63_quarter_strength -0.3 +0.3 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.5 -0.2 +1.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.2 -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.0 -0.3 +0.6 N.D. N.D.
cpg no stress control CPG no stress control +0.4 -0.3 +0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 -0.2 +0.3 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.8 -0.2 +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.0 +0.0 -0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.6 +0.3 -0.2 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control +0.6 +0.1 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.3 +0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +1.1 -0.0 -0.2 N.D. N.D.
cpg CPG +0.7 +0.1 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.4 -0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.2 +0.3 +0.5 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.7 +0.1 +0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +0.4 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.8 -0.1 +0.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.6 +0.6 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.9 +0.1 +0.6 N.D. N.D.
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