Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS18120 and RPSI07_RS18125 are separated by 368 nucleotidesRPSI07_RS18125 and RPSI07_RS18130 are separated by 92 nucleotidesRPSI07_RS18130 and RPSI07_RS18135 are separated by 154 nucleotidesRPSI07_RS18135 and RPSI07_RS18140 are separated by 28 nucleotides RPSI07_RS18120: RPSI07_RS18120 - nucleoside-diphosphate kinase, at 2,271,341 to 2,271,766 _RS18120 RPSI07_RS18125: RPSI07_RS18125 - BAX inhibitor (BI)-1/YccA family protein, at 2,272,135 to 2,272,836 _RS18125 RPSI07_RS18130: RPSI07_RS18130 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 2,272,929 to 2,274,281 _RS18130 RPSI07_RS18135: RPSI07_RS18135 - endonuclease, at 2,274,436 to 2,275,305 _RS18135 RPSI07_RS18140: RPSI07_RS18140 - RNA polymerase sigma factor RpoS, at 2,275,334 to 2,276,467 _RS18140
Group Condition RPSI07_RS18120 RPSI07_RS18125 RPSI07_RS18130 RPSI07_RS18135 RPSI07_RS18140
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.0 -0.6 +0.7 -9.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.1 -0.1 +0.6 -8.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.0 -0.0 +0.2 -8.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.1 -0.3 +0.4 -2.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.4 -0.5 +0.5 -2.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.2 -1.1 -0.1 +2.3
cpg CPG N.D. -0.4 -0.5 +0.5 +2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 -0.7 -0.3 +3.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.3 -0.5 +0.3 +4.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.1 -0.2 -0.1 +4.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -1.2 +0.4 +0.3 +3.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.6 -1.7 +0.1 +3.9
m63_quarter_strength M63_quarter_strength N.D. +0.4 -0.9 -0.5 +4.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.3 -1.3 +0.2 +4.0
cpg no stress control CPG no stress control N.D. +0.5 -0.2 +0.4 +2.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.9 -0.1 +0.3 +4.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.1 +0.1 +3.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.1 +0.5 +0.7 +2.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.3 +0.3 +0.5 +4.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.0 -0.5 +0.6 +3.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 -0.4 +0.3 +3.6
m63_quarter_strength M63_quarter_strength N.D. -0.4 -0.3 +0.4 +4.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.0 -0.1 +0.2 +3.9
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.0 +0.5 +3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 +0.0 +0.3 +3.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.7 -0.1 -0.3 +4.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.0 -0.2 -0.4 +4.2
m63_quarter_strength M63_quarter_strength N.D. -0.6 -0.3 +0.4 +5.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.4 -0.9 +0.3 +5.8
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.3 +0.0 -0.2 +6.5
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RPSI07_RS18120
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RPSI07_RS18125
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RPSI07_RS18140
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