Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS18095 and RPSI07_RS18100 are separated by 64 nucleotidesRPSI07_RS18100 and RPSI07_RS18105 are separated by 54 nucleotidesRPSI07_RS18105 and RPSI07_RS18110 overlap by 8 nucleotidesRPSI07_RS18110 and RPSI07_RS18115 overlap by 4 nucleotides RPSI07_RS18095: RPSI07_RS18095 - histidine--tRNA ligase, at 2,265,537 to 2,266,859 _RS18095 RPSI07_RS18100: RPSI07_RS18100 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 2,266,924 to 2,268,219 _RS18100 RPSI07_RS18105: RPSI07_RS18105 - DUF4115 domain-containing protein, at 2,268,274 to 2,269,368 _RS18105 RPSI07_RS18110: RPSI07_RS18110 - type IV pilus biogenesis/stability protein PilW, at 2,269,361 to 2,270,149 _RS18110 RPSI07_RS18115: RPSI07_RS18115 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,270,146 to 2,271,297 _RS18115
Group Condition RPSI07_RS18095 RPSI07_RS18100 RPSI07_RS18105 RPSI07_RS18110 RPSI07_RS18115
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -2.6 -3.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. -1.4 -3.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -1.4 -3.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. -2.0 -1.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. -1.6 -2.2
cpg no stress control CPG no stress control N.D. N.D. N.D. -1.0 -2.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. N.D. -0.6 -3.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. N.D. -1.4 -1.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. -1.4 -1.8
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -1.6 -1.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. N.D. +0.2 -3.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. -0.8 -2.1
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. N.D. -0.6 -2.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. +0.3 -3.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. -0.5 -2.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. -1.5 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. N.D. +0.7 -3.3
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. N.D. -0.9 -1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. N.D. N.D. -0.5 -1.8
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. N.D. -1.5 -0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. -0.3 -1.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. -0.1 -2.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. N.D. +0.5 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. +0.1 -2.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. -0.9 -1.2
cpg CPG N.D. N.D. N.D. -2.0 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. +0.5 -1.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. N.D. +1.4 -2.6
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. N.D. +1.1 -1.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. N.D. -0.9 +1.3
remove
RPSI07_RS18095
plot		 remove
RPSI07_RS18100
plot		 remove
RPSI07_RS18105		 remove
RPSI07_RS18110
plot		 remove
RPSI07_RS18115
plot