Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17695 and RPSI07_RS17700 are separated by 476 nucleotidesRPSI07_RS17700 and RPSI07_RS17705 are separated by 176 nucleotidesRPSI07_RS17705 and RPSI07_RS17710 are separated by 20 nucleotidesRPSI07_RS17710 and RPSI07_RS17715 overlap by 4 nucleotides RPSI07_RS17695: RPSI07_RS17695 - SMC-Scp complex subunit ScpB, at 2,174,778 to 2,175,671 _RS17695 RPSI07_RS17700: RPSI07_RS17700 - membrane protein, at 2,176,148 to 2,176,894 _RS17700 RPSI07_RS17705: RPSI07_RS17705 - fumarate/nitrate reduction transcriptional regulator Fnr, at 2,177,071 to 2,177,799 _RS17705 RPSI07_RS17710: RPSI07_RS17710 - hypothetical protein, at 2,177,820 to 2,178,074 _RS17710 RPSI07_RS17715: RPSI07_RS17715 - membrane protein, at 2,178,071 to 2,178,301 _RS17715
Group Condition RPSI07_RS17695 RPSI07_RS17700 RPSI07_RS17705 RPSI07_RS17710 RPSI07_RS17715
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.5 -1.4 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 -1.1 -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.2 -0.5 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.3 +0.1 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.0 +0.2 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 +0.4 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 -0.3 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.4 -0.4 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 +0.4 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.5 -0.6 +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.5 -0.5 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.1 -0.5 +0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.2 +0.5 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.2 -0.3 +0.3 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 +0.6 -0.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.1 +0.6 -0.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 +1.1 -1.0 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.8 -0.0 N.D.
cpg CPG N.D. -0.3 +0.1 +0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 +0.4 +0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.0 +0.7 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -0.1 +0.5 +0.3 N.D.
m63_quarter_strength M63_quarter_strength N.D. -0.2 -0.4 +1.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 +0.5 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.3 +0.2 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.3 +0.0 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.3 +1.2 -0.0 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.2 -0.4 +1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.5 -0.2 +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.5 +0.4 +0.1 N.D.
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RPSI07_RS17695
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RPSI07_RS17700
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RPSI07_RS17715
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