Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17595 and RPSI07_RS17600 are separated by 115 nucleotidesRPSI07_RS17600 and RPSI07_RS17605 are separated by 249 nucleotidesRPSI07_RS17605 and RPSI07_RS25150 are separated by 115 nucleotidesRPSI07_RS25150 and RPSI07_RS25155 are separated by 68 nucleotides RPSI07_RS17595: RPSI07_RS17595 - asparaginase, at 2,150,531 to 2,151,526 _RS17595 RPSI07_RS17600: RPSI07_RS17600 - ferredoxin--NADP reductase, at 2,151,642 to 2,152,418 _RS17600 RPSI07_RS17605: RPSI07_RS17605 - transcriptional repressor LexA, at 2,152,668 to 2,153,318 _RS17605 RPSI07_RS25150: RPSI07_RS25150 - hypothetical protein, at 2,153,434 to 2,153,619 _RS25150 RPSI07_RS25155: RPSI07_RS25155 - hypothetical protein, at 2,153,688 to 2,153,891 _RS25155
Group Condition RPSI07_RS17595 RPSI07_RS17600 RPSI07_RS17605 RPSI07_RS25150 RPSI07_RS25155
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. -2.3 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 N.D. N.D. -1.7 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. N.D. -1.7 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.9 N.D. N.D. -0.9 -0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.5 N.D. N.D. -0.3 -0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.1 N.D. N.D. -0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 N.D. N.D. -0.9 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 N.D. N.D. -1.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.6 N.D. N.D. -0.6 -0.3
cpg CPG -0.8 N.D. N.D. -0.6 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.7 N.D. N.D. -0.7 -0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.0 N.D. N.D. -0.4 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 N.D. N.D. -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.4 N.D. N.D. -0.7 +0.3
m63_quarter_strength M63_quarter_strength -0.2 N.D. N.D. -1.1 +0.6
smsa no antibiotic control SMSA no antibiotic control -0.9 N.D. N.D. +0.3 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.0 N.D. N.D. +0.4 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 N.D. N.D. +0.5 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 N.D. N.D. -0.5 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 N.D. N.D. +0.7 -0.3
smsa no antibiotic control SMSA no antibiotic control -0.4 N.D. N.D. -0.3 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 N.D. N.D. +0.8 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.0 N.D. N.D. -0.5 +0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.4 N.D. N.D. +0.9 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.5 N.D. N.D. +1.3 +0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.7 N.D. N.D. +1.1 +0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.3 N.D. N.D. +1.3 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 N.D. N.D. +0.7 +0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. N.D. +1.0 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 N.D. N.D. +1.8 +0.5
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