Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17590 and RPSI07_RS17595 are separated by 93 nucleotidesRPSI07_RS17595 and RPSI07_RS17600 are separated by 115 nucleotidesRPSI07_RS17600 and RPSI07_RS17605 are separated by 249 nucleotidesRPSI07_RS17605 and RPSI07_RS25150 are separated by 115 nucleotides RPSI07_RS17590: RPSI07_RS17590 - 30S ribosomal protein S6, at 2,150,069 to 2,150,437 _RS17590 RPSI07_RS17595: RPSI07_RS17595 - asparaginase, at 2,150,531 to 2,151,526 _RS17595 RPSI07_RS17600: RPSI07_RS17600 - ferredoxin--NADP reductase, at 2,151,642 to 2,152,418 _RS17600 RPSI07_RS17605: RPSI07_RS17605 - transcriptional repressor LexA, at 2,152,668 to 2,153,318 _RS17605 RPSI07_RS25150: RPSI07_RS25150 - hypothetical protein, at 2,153,434 to 2,153,619 _RS25150
Group Condition RPSI07_RS17590 RPSI07_RS17595 RPSI07_RS17600 RPSI07_RS17605 RPSI07_RS25150
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 N.D. N.D. -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. N.D. -2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 N.D. N.D. -1.7
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.5 N.D. N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.8 N.D. N.D. -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.9 N.D. N.D. -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. N.D. -1.2
cpg CPG N.D. -0.8 N.D. N.D. -0.6
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.1 N.D. N.D. -0.3
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. -1.0 N.D. N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -0.7 N.D. N.D. -0.7
m63_quarter_strength M63_quarter_strength N.D. -0.2 N.D. N.D. -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.6 N.D. N.D. -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.4 N.D. N.D. -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 N.D. N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. -0.5 N.D. N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 N.D. N.D. -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -1.0 N.D. N.D. +0.4
smsa no antibiotic control SMSA no antibiotic control N.D. -0.9 N.D. N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.7 N.D. N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.5 N.D. N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.8 N.D. N.D. +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.3 N.D. N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.4 N.D. N.D. +0.7
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. -0.7 N.D. N.D. +1.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.4 N.D. N.D. +0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.5 N.D. N.D. +1.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.1 N.D. N.D. +1.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.3 N.D. N.D. +1.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.4 N.D. N.D. +1.8
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