Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17495 and RPSI07_RS17500 are separated by 335 nucleotidesRPSI07_RS17500 and RPSI07_RS17505 are separated by 4 nucleotidesRPSI07_RS17505 and RPSI07_RS17510 are separated by 110 nucleotidesRPSI07_RS17510 and RPSI07_RS17515 are separated by 28 nucleotides RPSI07_RS17495: RPSI07_RS17495 - pyridoxal phosphate-dependent aminotransferase, at 2,132,112 to 2,133,353 _RS17495 RPSI07_RS17500: RPSI07_RS17500 - hypothetical protein, at 2,133,689 to 2,134,069 _RS17500 RPSI07_RS17505: RPSI07_RS17505 - glycosyltransferase family 39 protein, at 2,134,074 to 2,135,744 _RS17505 RPSI07_RS17510: RPSI07_RS17510 - 4-amino-4-deoxy-L-arabinose transferase, at 2,135,855 to 2,136,226 _RS17510 RPSI07_RS17515: RPSI07_RS17515 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,136,255 to 2,137,418 _RS17515
Group Condition RPSI07_RS17495 RPSI07_RS17500 RPSI07_RS17505 RPSI07_RS17510 RPSI07_RS17515
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.6 -3.2 N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -5.1 -0.7 N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -4.4 -0.8 N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -5.5 +0.5 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.9 -2.0 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 -1.9 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.3 -0.7 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength -2.6 -1.3 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.6 -1.4 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.4 -1.6 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength -3.0 -0.8 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.0 -0.7 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 -1.1 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength -2.0 -1.2 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.6 -0.6 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.7 -2.3 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 -0.8 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.8 -0.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.4 -2.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.4 -1.9 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.5 -1.8 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 -2.0 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 -1.9 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.3 +0.2 N.D. N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control -0.9 -1.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 -1.7 N.D. N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control -0.2 -1.5 N.D. N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 +0.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.3 -1.5 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 +1.4 N.D. N.D. N.D.
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RPSI07_RS17500
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RPSI07_RS17515
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