Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17215 and RPSI07_RS17220 are separated by 6 nucleotidesRPSI07_RS17220 and RPSI07_RS17225 are separated by 1 nucleotidesRPSI07_RS17225 and RPSI07_RS17230 are separated by 10 nucleotidesRPSI07_RS17230 and RPSI07_RS17235 are separated by 64 nucleotides RPSI07_RS17215: RPSI07_RS17215 - D-aminopeptidase, at 2,068,801 to 2,069,616 _RS17215 RPSI07_RS17220: RPSI07_RS17220 - S58 family peptidase, at 2,069,623 to 2,070,648 _RS17220 RPSI07_RS17225: RPSI07_RS17225 - glutathione ABC transporter permease GsiD, at 2,070,650 to 2,071,549 _RS17225 RPSI07_RS17230: RPSI07_RS17230 - glutathione ABC transporter permease GsiC, at 2,071,560 to 2,072,483 _RS17230 RPSI07_RS17235: RPSI07_RS17235 - glutathione ABC transporter substrate-binding protein GsiB, at 2,072,548 to 2,074,101 _RS17235
Group Condition RPSI07_RS17215 RPSI07_RS17220 RPSI07_RS17225 RPSI07_RS17230 RPSI07_RS17235
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -3.2 +0.2 -0.5 +0.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.2 +0.2 +0.9 -0.5 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.0 -0.4 -0.5 -0.5 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.3 -0.0 +0.0 +0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.3 +0.4 +0.9 +0.0 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.1 -0.5 +0.4 +0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.9 -0.5 +0.3 +0.2 +0.2
smsa no antibiotic control SMSA no antibiotic control -1.9 -0.1 +0.3 +0.5 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.1 -0.2 +0.3 -0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.9 -0.4 +0.4 +0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 -0.1 +0.1 +1.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -0.3 +0.4 +0.6 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +1.2 -0.2 -0.0 -0.5 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 -0.6 +0.8 +0.6 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.3 +1.1 -0.3 +0.1 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.8 +0.1 -0.6 +0.8 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.7 +0.5 -0.6 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.4 -0.1 +0.6 +0.3 +0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.8 -0.1 +0.5 -0.3 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +1.2 -0.4 +0.2 -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.7 +0.6 -0.5 +0.4 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +1.4 +0.1 -0.0 +0.4 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +1.7 -0.1 +0.1 +0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 -0.0 +0.2 +0.7 +0.3
cpg CPG +1.0 +0.4 +0.1 +0.6 -0.0
m63_quarter_strength M63_quarter_strength -0.3 +0.6 +0.8 +1.6 -0.0
m63_quarter_strength M63_quarter_strength +1.1 +0.7 +0.7 +0.1 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.0 +0.5 +1.3 +0.6
m63_quarter_strength M63_quarter_strength +1.3 +0.9 +0.0 +0.8 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +3.5 +0.0 +0.1 +0.0 -0.1
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