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Protein
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Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS17160 and RPSI07_RS17165 are separated by 59 nucleotides
RPSI07_RS17165 and RPSI07_RS17170 are separated by 6 nucleotides
RPSI07_RS17170 and RPSI07_RS17175 are separated by 32 nucleotides
RPSI07_RS17175 and RPSI07_RS17180 are separated by 12 nucleotides
RPSI07_RS17160: RPSI07_RS17160 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,055,399 to 2,056,226
_RS17160
RPSI07_RS17165: RPSI07_RS17165 - hypothetical protein, at 2,056,286 to 2,056,696
_RS17165
RPSI07_RS17170: RPSI07_RS17170 - arsenate reductase, at 2,056,703 to 2,057,059
_RS17170
RPSI07_RS17175: RPSI07_RS17175 - succinyl-diaminopimelate desuccinylase, at 2,057,092 to 2,058,243
_RS17175
RPSI07_RS17180: RPSI07_RS17180 - CYTH domain-containing protein, at 2,058,256 to 2,058,774
_RS17180
Group
Condition
RPSI07
_RS17160
RPSI07
_RS17165
RPSI07
_RS17170
RPSI07
_RS17175
RPSI07
_RS17180
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
-3.2
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
N.D.
-3.1
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
N.D.
-3.0
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
-2.6
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
-2.4
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
-2.2
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
-2.1
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
N.D.
N.D.
-2.1
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-2.0
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
N.D.
N.D.
-2.0
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
N.D.
N.D.
-1.9
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
-1.9
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
-1.8
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
-1.8
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
N.D.
-1.7
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
N.D.
-1.7
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
N.D.
N.D.
-1.7
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
N.D.
N.D.
-1.6
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
-1.6
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
N.D.
N.D.
-1.6
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
N.D.
N.D.
-1.6
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-1.6
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
-1.5
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
N.D.
N.D.
-1.5
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-1.3
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
N.D.
N.D.
-1.3
N.D.
N.D.
xylem sap
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap
N.D.
N.D.
-1.3
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-1.3
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
-1.3
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
-1.3
N.D.
N.D.
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