Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS17020 and RPSI07_RS25135 are separated by 185 nucleotidesRPSI07_RS25135 and RPSI07_RS17025 are separated by 29 nucleotidesRPSI07_RS17025 and RPSI07_RS17030 are separated by 19 nucleotidesRPSI07_RS17030 and RPSI07_RS17035 are separated by 4 nucleotides RPSI07_RS17020: RPSI07_RS17020 - kinase/pyrophosphorylase, at 2,019,664 to 2,020,503 _RS17020 RPSI07_RS25135: RPSI07_RS25135 - metal-dependent hydrolase, at 2,020,689 to 2,020,964 _RS25135 RPSI07_RS17025: RPSI07_RS17025 - RNA methyltransferase, at 2,020,994 to 2,021,773 _RS17025 RPSI07_RS17030: RPSI07_RS17030 - ribonuclease HII, at 2,021,793 to 2,022,503 _RS17030 RPSI07_RS17035: RPSI07_RS17035 - lipid-A-disaccharide synthase, at 2,022,508 to 2,023,680 _RS17035
Group Condition RPSI07_RS17020 RPSI07_RS25135 RPSI07_RS17025 RPSI07_RS17030 RPSI07_RS17035
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -1.0 -4.7 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -1.0 -3.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 -4.5 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.7 -2.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.6 -2.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. -1.0 -1.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -1.3 -1.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -1.7 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -0.2 -1.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. -1.0 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +1.0 -2.5 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. +0.1 -1.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. +1.2 -2.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. +0.7 -1.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. +1.5 -2.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -1.3 +0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.7 -1.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +1.1 -1.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -0.9 +0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.8 +1.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. +0.7 +0.6 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. +0.7 +0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.1 +1.3 N.D.
m63_quarter_strength M63_quarter_strength N.D. N.D. +2.5 -0.9 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. +0.8 +0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. +0.7 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. +0.6 +1.2 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. +0.8 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. +1.2 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +1.3 +1.5 N.D.
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RPSI07_RS17020
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RPSI07_RS25135
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RPSI07_RS17030
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RPSI07_RS17035
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