Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS16200 and RPSI07_RS16205 are separated by 51 nucleotidesRPSI07_RS16205 and RPSI07_RS16210 are separated by 87 nucleotidesRPSI07_RS16210 and RPSI07_RS16215 are separated by 203 nucleotidesRPSI07_RS16215 and RPSI07_RS16220 are separated by 127 nucleotides RPSI07_RS16200: RPSI07_RS16200 - DUF1842 domain-containing protein, at 1,795,374 to 1,796,000 _RS16200 RPSI07_RS16205: RPSI07_RS16205 - DUF1842 domain-containing protein, at 1,796,052 to 1,796,633 _RS16205 RPSI07_RS16210: RPSI07_RS16210 - GDL motif peptide-associated radical SAM/SPASM maturase, at 1,796,721 to 1,798,196 _RS16210 RPSI07_RS16215: RPSI07_RS16215 - LysR family transcriptional regulator, at 1,798,400 to 1,799,320 _RS16215 RPSI07_RS16220: RPSI07_RS16220 - KR domain-containing protein, at 1,799,448 to 1,800,218 _RS16220
Group Condition RPSI07_RS16200 RPSI07_RS16205 RPSI07_RS16210 RPSI07_RS16215 RPSI07_RS16220
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.5 -0.1 -1.0 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.3 -0.1 -0.8 -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 -1.0 -0.1 -0.5 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 -1.0 -0.0 +0.3 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.6 +0.2 +0.2 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.3 -0.4 +0.1 -0.2 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.2 +0.5 -0.6 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 -0.4 -0.0 +0.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.2 +0.2 +0.0 +0.6 -0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.4 -0.3 -0.2 +0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +0.9 -0.2 -0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.0 +0.2 -0.1 +0.7 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.1 +0.2 +0.9 -0.5
stress SMSA with Ralstonia_antibiotic_mix +0.0 +0.3 +0.1 +0.7 -0.5
cpg no stress control CPG no stress control +0.3 -0.2 -0.0 +0.9 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 -0.0 +0.0 +0.8 -0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.6 -0.2 +0.6 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 +0.2 +0.0 +0.8 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.0 +0.1 -0.1 +1.0 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.1 +0.8 -0.2 -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.1 +0.0 -0.1 +0.9 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.2 -0.1 +1.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 +0.1 +0.0 +0.9 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 -0.0 -0.2 +0.6 +0.7
smsa no antibiotic control SMSA no antibiotic control +0.2 +0.5 +0.1 +0.9 -0.3
m63_quarter_strength M63_quarter_strength +0.3 +0.2 +0.2 +0.8 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.0 +1.3 +0.0 +0.6 -0.5
m63_quarter_strength M63_quarter_strength +0.3 +0.4 +0.4 +0.4 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.3 +0.2 +0.4 +0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +0.3 +0.2 +0.6 +0.6
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