Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS16060 and RPSI07_RS16065 are separated by 271 nucleotidesRPSI07_RS16065 and RPSI07_RS16070 are separated by 38 nucleotidesRPSI07_RS16070 and RPSI07_RS16075 are separated by 180 nucleotidesRPSI07_RS16075 and RPSI07_RS16080 are separated by 71 nucleotides RPSI07_RS16060: RPSI07_RS16060 - peroxiredoxin, at 1,759,594 to 1,760,142 _RS16060 RPSI07_RS16065: RPSI07_RS16065 - two-component sensor histidine kinase, at 1,760,414 to 1,761,775 _RS16065 RPSI07_RS16070: RPSI07_RS16070 - two-component system response regulator OmpR, at 1,761,814 to 1,762,536 _RS16070 RPSI07_RS16075: RPSI07_RS16075 - hypothetical protein, at 1,762,717 to 1,763,166 _RS16075 RPSI07_RS16080: RPSI07_RS16080 - DUF1800 domain-containing protein, at 1,763,238 to 1,764,854 _RS16080
Group Condition RPSI07_RS16060 RPSI07_RS16065 RPSI07_RS16070 RPSI07_RS16075 RPSI07_RS16080
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.2 -1.5 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.3 -1.1 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.4 -0.2 -1.1 N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix -0.5 -0.1 -0.9 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 +0.4 -1.0 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 +0.3 -0.9 N.D. +0.0
smsa no antibiotic control SMSA no antibiotic control -0.1 -0.1 -1.1 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.1 -0.1 -1.1 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.2 -0.9 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.5 -0.7 N.D. -0.1
cpg no stress control CPG no stress control -0.1 -0.0 -1.1 N.D. +0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 -0.2 -0.7 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.6 +0.2 +0.6 N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.9 -0.5 N.D. -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.6 +0.1 -0.6 N.D. -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 +0.1 -0.6 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +1.0 -0.6 N.D. -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 +0.3 -0.3 N.D. -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +1.1 -0.7 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.3 +0.6 N.D. -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 +0.3 -0.5 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 +0.4 +0.8 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.2 +0.0 +1.4 N.D. -0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.0 +1.1 N.D. -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 +1.1 +0.4 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -0.2 +0.7 N.D. +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +0.7 -0.1 N.D. -0.2
m63_quarter_strength M63_quarter_strength +0.4 -0.1 +0.9 N.D. +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.7 +0.0 +0.8 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 +0.3 +1.5 N.D. -0.1
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