Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS15780 and RPSI07_RS15785 are separated by 16 nucleotidesRPSI07_RS15785 and RPSI07_RS15790 are separated by 149 nucleotidesRPSI07_RS15790 and RPSI07_RS15795 are separated by 60 nucleotidesRPSI07_RS15795 and RPSI07_RS15800 are separated by 107 nucleotides RPSI07_RS15780: RPSI07_RS15780 - homoprotocatechuate degradation operon regulator HpaR, at 1,696,004 to 1,696,468 _RS15780 RPSI07_RS15785: RPSI07_RS15785 - exodeoxyribonuclease III, at 1,696,485 to 1,697,294 _RS15785 RPSI07_RS15790: RPSI07_RS15790 - cytosine deaminase, at 1,697,444 to 1,698,715 _RS15790 RPSI07_RS15795: RPSI07_RS15795 - oligopeptidase A, at 1,698,776 to 1,700,896 _RS15795 RPSI07_RS15800: RPSI07_RS15800 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 1,701,004 to 1,701,873 _RS15800
Group Condition RPSI07_RS15780 RPSI07_RS15785 RPSI07_RS15790 RPSI07_RS15795 RPSI07_RS15800
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -1.3 -0.7 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. -1.6 -0.3 -0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -1.6 -0.1 -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -1.6 +0.1 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.8 -0.3 -0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.2 +0.1 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -0.8 -0.5 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -1.6 -0.1 +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -0.8 -0.6 -0.2 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. -0.8 -0.4 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.7 -0.4 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.9 -0.0 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. -0.7 -0.5 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 -0.1 -0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -1.0 -0.2 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.9 -0.3 -0.1 N.D.
cpg no stress control CPG no stress control N.D. -1.2 -0.0 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. -1.3 +0.1 +0.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -1.1 -0.3 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -1.0 -0.2 +0.5 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. -0.8 +0.4 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.9 +0.1 +0.5 N.D.
m63_quarter_strength M63_quarter_strength N.D. -0.4 -0.5 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.6 -0.6 -0.3 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 +0.3 +1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +1.2 +0.0 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.9 -0.1 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +1.3 +0.3 -0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +1.0 +0.1 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +1.9 +0.2 +1.1 N.D.
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