Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS15680 and RPSI07_RS15685 are separated by 26 nucleotidesRPSI07_RS15685 and RPSI07_RS15690 are separated by 22 nucleotidesRPSI07_RS15690 and RPSI07_RS15695 are separated by 364 nucleotidesRPSI07_RS15695 and RPSI07_RS15700 are separated by 28 nucleotides RPSI07_RS15680: RPSI07_RS15680 - RidA family protein, at 1,677,098 to 1,677,460 _RS15680 RPSI07_RS15685: RPSI07_RS15685 - bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 1,677,487 to 1,679,727 _RS15685 RPSI07_RS15690: RPSI07_RS15690 - tRNA-Val, at 1,679,750 to 1,679,826 _RS15690 RPSI07_RS15695: RPSI07_RS15695 - threonine--tRNA ligase, at 1,680,191 to 1,682,098 _RS15695 RPSI07_RS15700: RPSI07_RS15700 - translation initiation factor IF-3, at 1,682,127 to 1,682,663 _RS15700
Group Condition RPSI07_RS15680 RPSI07_RS15685 RPSI07_RS15690 RPSI07_RS15695 RPSI07_RS15700
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.0 +0.0 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.0 +0.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.8 +0.2 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.7 +0.2 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.3 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 +0.3 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.6 +0.2 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +0.6 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.6 N.D. N.D. N.D.
cpg CPG +0.6 +0.2 N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.5 +0.3 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +0.4 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.6 +0.2 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.7 +0.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.4 +0.4 N.D. N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control +0.6 +0.3 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.7 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.6 +0.4 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.8 +0.2 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.7 +0.3 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.9 +0.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 +0.5 N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.4 +0.6 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +0.3 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.8 +0.5 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +1.0 +0.3 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +1.6 -0.1 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength +0.3 +1.3 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength +0.5 +1.3 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength +0.8 +1.5 N.D. N.D. N.D.
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RPSI07_RS15680
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RPSI07_RS15685
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RPSI07_RS15695
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RPSI07_RS15700
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