Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS15390 and RPSI07_RS15395 are separated by 887 nucleotidesRPSI07_RS15395 and RPSI07_RS15400 are separated by 42 nucleotidesRPSI07_RS15400 and RPSI07_RS15405 are separated by 159 nucleotidesRPSI07_RS15405 and RPSI07_RS15410 overlap by 4 nucleotides RPSI07_RS15390: RPSI07_RS15390 - hypothetical protein, at 1,616,421 to 1,616,693 _RS15390 RPSI07_RS15395: RPSI07_RS15395 - UPF0182 family protein, at 1,617,581 to 1,620,334 _RS15395 RPSI07_RS15400: RPSI07_RS15400 - LysR family transcriptional regulator, at 1,620,377 to 1,621,270 _RS15400 RPSI07_RS15405: RPSI07_RS15405 - ABC transporter permease, at 1,621,430 to 1,622,293 _RS15405 RPSI07_RS15410: RPSI07_RS15410 - ABC transporter ATP-binding protein, at 1,622,290 to 1,623,336 _RS15410
Group Condition RPSI07_RS15390 RPSI07_RS15395 RPSI07_RS15400 RPSI07_RS15405 RPSI07_RS15410
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.1 -0.3 -0.4 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.1 -0.2 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -0.1 -0.1 -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -0.0 -0.3 +0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 +0.2 -0.3 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.2 +0.4 +0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.0 +0.1 -0.1 +0.6
cpg CPG N.D. -0.1 +0.3 +0.1 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.0 +0.3 -0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.0 +0.3 -0.1 +0.4
m63_quarter_strength M63_quarter_strength N.D. -0.0 +0.2 +0.1 +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. +0.0 +0.2 +0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.2 +0.0 +0.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.1 +0.1 +0.5 +0.1
cpg CPG N.D. +0.1 +0.2 +0.1 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -0.0 +0.5 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 +0.1 +0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.2 +0.4 +0.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.1 +0.4 +0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.1 +0.2 +0.3 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.2 +0.3 +0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.1 +0.3 +0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.1 +0.3 +0.6 +0.0
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.1 +0.4 +0.3 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. +0.2 +0.4 +0.3 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.1 +0.7 +0.0 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +0.2 +0.4 +0.2 +0.4
smsa no antibiotic control SMSA no antibiotic control N.D. +0.1 +0.4 +0.4 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.2 +0.3 +0.7 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.3 +0.5 +0.4 +0.4
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