Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS15260 and RPSI07_RS15265 are separated by 20 nucleotidesRPSI07_RS15265 and RPSI07_RS15270 are separated by 49 nucleotidesRPSI07_RS15270 and RPSI07_RS15275 are separated by 95 nucleotidesRPSI07_RS15275 and RPSI07_RS15280 are separated by 126 nucleotides RPSI07_RS15260: RPSI07_RS15260 - transcription elongation factor GreA, at 1,588,062 to 1,588,538 _RS15260 RPSI07_RS15265: RPSI07_RS15265 - DUF4149 domain-containing protein, at 1,588,559 to 1,589,026 _RS15265 RPSI07_RS15270: RPSI07_RS15270 - RNA-binding protein, at 1,589,076 to 1,589,576 _RS15270 RPSI07_RS15275: RPSI07_RS15275 - RlmE family RNA methyltransferase, at 1,589,672 to 1,590,337 _RS15275 RPSI07_RS15280: RPSI07_RS15280 - ATP-dependent zinc metalloprotease FtsH, at 1,590,464 to 1,592,350 _RS15280
Group Condition RPSI07_RS15260 RPSI07_RS15265 RPSI07_RS15270 RPSI07_RS15275 RPSI07_RS15280
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 +0.2 -0.9 N.D. -9.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.7 -0.2 -0.4 N.D. -8.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.4 -0.0 -0.4 N.D. -7.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.6 +0.5 +0.6 N.D. -8.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.3 -0.7 N.D. -6.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -1.1 -0.9 N.D. -5.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.1 -0.0 N.D. -7.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 +0.3 +0.4 N.D. -8.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 +0.1 -0.1 N.D. -7.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.3 +0.3 N.D. -7.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 +0.3 +0.3 N.D. -7.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.3 +0.2 -0.2 N.D. -7.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 +0.1 +1.0 N.D. -7.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.0 -0.5 N.D. -5.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.1 +0.0 N.D. -6.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.5 -0.4 N.D. -5.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.0 +0.3 N.D. -4.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 +0.9 -0.8 N.D. -4.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.2 -0.4 N.D. -5.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 -0.2 -1.3 N.D. -4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.7 +0.5 +0.2 N.D. -4.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.6 -0.5 N.D. -4.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.2 -0.3 N.D. -5.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 -0.1 N.D. -4.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.1 -0.2 N.D. -4.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.2 +0.5 -0.5 N.D. -3.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 +1.2 -0.6 N.D. -3.9
stress SMSA with Ralstonia_antibiotic_mix -1.1 +0.2 -0.6 N.D. -2.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.1 +0.4 -0.7 N.D. -2.5
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.4 -0.8 -0.1 N.D. -3.8
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RPSI07_RS15260
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RPSI07_RS15265
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