Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS14850 and RPSI07_RS14855 are separated by 456 nucleotidesRPSI07_RS14855 and RPSI07_RS14860 are separated by 114 nucleotidesRPSI07_RS14860 and RPSI07_RS14865 are separated by 20 nucleotidesRPSI07_RS14865 and RPSI07_RS14870 are separated by 177 nucleotides RPSI07_RS14850: RPSI07_RS14850 - hypothetical protein, at 1,501,388 to 1,501,729 _RS14850 RPSI07_RS14855: RPSI07_RS14855 - dicarboxylate/amino acid:cation symporter, at 1,502,186 to 1,503,478 _RS14855 RPSI07_RS14860: RPSI07_RS14860 - glutamate racemase, at 1,503,593 to 1,504,426 _RS14860 RPSI07_RS14865: RPSI07_RS14865 - fumarate hydratase, at 1,504,447 to 1,505,970 _RS14865 RPSI07_RS14870: RPSI07_RS14870 - membrane protein, at 1,506,148 to 1,506,687 _RS14870
Group Condition RPSI07_RS14850 RPSI07_RS14855 RPSI07_RS14860 RPSI07_RS14865 RPSI07_RS14870
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.3 -0.3 -6.2 -1.4 -0.3
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 -0.4 -5.1 -3.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.3 -1.6 -3.2 -0.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.5 +0.1 -3.9 -1.9 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -0.6 -1.8 -2.4 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.6 -2.0 -1.9 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.1 -1.5 -2.6 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.6 -0.8 -2.5 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.6 -1.0 -2.7 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.4 -2.6 -1.5 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.0 -1.5 -2.8 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.4 -0.9 -2.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -1.2 -1.8 -1.1 +0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 -1.3 -1.9 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.5 -1.2 -1.4 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.4 -1.0 -0.3 -1.4 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.4 -1.5 -1.7 -0.3
stress SMSA with Ralstonia_antibiotic_mix -0.2 -1.0 -0.2 -1.3 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.3 -1.9 -0.2 +0.1
cpg CPG -0.4 -0.7 +0.1 -1.7 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.7 -0.4 -0.2 -2.5 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.5 -0.3 -1.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.1 -0.6 -0.4 -1.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 -0.3 -0.2 -1.5 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.4 -0.9 +0.6 -1.4 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.3 +0.2 -2.0 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 -0.1 -0.3 -2.0 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -0.5 +0.2 -1.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.6 +0.3 -0.1 -1.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 +1.5 +0.8 -1.1 -0.4
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