Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS14660 and RPSI07_RS14665 are separated by 245 nucleotidesRPSI07_RS14665 and RPSI07_RS14670 are separated by 10 nucleotidesRPSI07_RS14670 and RPSI07_RS14675 are separated by 3 nucleotidesRPSI07_RS14675 and RPSI07_RS14680 are separated by 35 nucleotides RPSI07_RS14660: RPSI07_RS14660 - GntR family transcriptional regulator, at 1,464,708 to 1,465,520 _RS14660 RPSI07_RS14665: RPSI07_RS14665 - succinate dehydrogenase, cytochrome b556 subunit, at 1,465,766 to 1,466,176 _RS14665 RPSI07_RS14670: RPSI07_RS14670 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 1,466,187 to 1,466,552 _RS14670 RPSI07_RS14675: RPSI07_RS14675 - succinate dehydrogenase flavoprotein subunit, at 1,466,556 to 1,468,334 _RS14675 RPSI07_RS14680: RPSI07_RS14680 - succinate dehydrogenase iron-sulfur subunit, at 1,468,370 to 1,469,071 _RS14680
Group Condition RPSI07_RS14660 RPSI07_RS14665 RPSI07_RS14670 RPSI07_RS14675 RPSI07_RS14680
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.1 N.D. N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.8 N.D. N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.8 N.D. N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.5 N.D. N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 N.D. N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.4 N.D. N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -1.4 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -1.3 N.D. N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.2 N.D. N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.1 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.1 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.0 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -1.0 N.D. N.D. N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.0 N.D. N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 N.D. N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.9 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.9 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.8 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix -0.8 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.8 N.D. N.D. N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 N.D. N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.8 N.D. N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.8 N.D. N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.8 N.D. N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.8 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.7 N.D. N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.7 N.D. N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.7 N.D. N.D. N.D. N.D.
cpg no stress control CPG no stress control -0.7 N.D. N.D. N.D. N.D.
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