Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS14500 and RPSI07_RS14505 are separated by 1111 nucleotidesRPSI07_RS14505 and RPSI07_RS14510 overlap by 4 nucleotidesRPSI07_RS14510 and RPSI07_RS14515 are separated by 140 nucleotidesRPSI07_RS14515 and RPSI07_RS14520 are separated by 27 nucleotides RPSI07_RS14500: RPSI07_RS14500 - urease accessory protein UreG, at 1,432,323 to 1,432,955 _RS14500 RPSI07_RS14505: RPSI07_RS14505 - fatty acid desaturase, at 1,434,067 to 1,435,008 _RS14505 RPSI07_RS14510: RPSI07_RS14510 - amino acid transporter, at 1,435,005 to 1,435,613 _RS14510 RPSI07_RS14515: RPSI07_RS14515 - hypothetical protein, at 1,435,754 to 1,436,053 _RS14515 RPSI07_RS14520: RPSI07_RS14520 - isoprenylcysteine carboxylmethyltransferase family protein, at 1,436,081 to 1,436,740 _RS14520
Group Condition RPSI07_RS14500 RPSI07_RS14505 RPSI07_RS14510 RPSI07_RS14515 RPSI07_RS14520
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.4 -0.1 -1.2 -0.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.4 +0.1 -0.2 +0.4 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.4 -0.1 -1.0 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 +0.0 +0.3 +0.3 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.1 +0.5 -0.5 -0.5
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 +0.2 +0.2 +0.3 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.1 -0.0 +0.2 +0.8 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 -0.1 +0.4 +0.4 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.0 +0.1 +0.5 +0.6 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 -0.2 -0.0 -0.5 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.0 +0.1 +0.1 -0.7 +0.8
stress SMSA with Ralstonia_antibiotic_mix -0.0 -0.1 +0.4 +0.5 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.2 -0.1 +0.1 -0.5 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 -0.1 -0.2 -0.4 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.1 -0.2 -0.3 +0.6
smsa no antibiotic control SMSA no antibiotic control -0.0 +0.0 -0.0 -0.7 +1.1
cpg CPG +0.2 +0.2 +0.6 -0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix +0.0 -0.0 -0.3 -0.4 +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 +0.2 -0.3 -0.6 +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 +0.3 -0.2 -0.5 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.0 +0.2 +0.6 +0.9 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.3 -0.5 +0.5
smsa no antibiotic control SMSA no antibiotic control +0.2 +0.1 +0.3 +0.6 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 +0.1 +0.3 +0.4 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.4 -0.1 +0.4 +0.7 -0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.2 +0.0 +0.9 +0.5 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 +0.1 +0.4 +0.8 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 -0.1 -0.1 -0.2 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 -0.1 +0.3 +0.7 +0.8
m63_quarter_strength M63_quarter_strength +0.3 +0.2 +0.3 +0.2 +0.9
remove
RPSI07_RS14500
plot
remove
RPSI07_RS14505
plot
remove
RPSI07_RS14510
remove
RPSI07_RS14515
plot
remove
RPSI07_RS14520
plot