Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS14055 and RPSI07_RS14060 are separated by 133 nucleotidesRPSI07_RS14060 and RPSI07_RS14065 overlap by 4 nucleotidesRPSI07_RS14065 and RPSI07_RS14070 are separated by 42 nucleotidesRPSI07_RS14070 and RPSI07_RS14075 are separated by 4 nucleotides RPSI07_RS14055: RPSI07_RS14055 - porin, at 1,343,946 to 1,345,013 _RS14055 RPSI07_RS14060: RPSI07_RS14060 - OHCU decarboxylase, at 1,345,147 to 1,345,668 _RS14060 RPSI07_RS14065: RPSI07_RS14065 - allantoinase PuuE, at 1,345,665 to 1,346,627 _RS14065 RPSI07_RS14070: RPSI07_RS14070 - 8-oxoguanine deaminase, at 1,346,670 to 1,348,094 _RS14070 RPSI07_RS14075: RPSI07_RS14075 - purine permease, at 1,348,099 to 1,349,505 _RS14075
Group Condition RPSI07_RS14055 RPSI07_RS14060 RPSI07_RS14065 RPSI07_RS14070 RPSI07_RS14075
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.3 -0.9 -0.4 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -0.1 -1.2 -0.6 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.0 -1.3 -0.5 -0.0
cpg CPG N.D. -0.1 -0.6 -0.2 -0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.5 -1.1 -0.5 +0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.5 -0.4 -0.3 -0.3
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.1 -0.7 +0.0 -0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -0.2 -1.2 -0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.1 -0.8 +0.2 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -0.5 -1.1 -0.2 +0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.3 -0.9 -0.3 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.6 -1.1 -0.2 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.3 -1.2 +0.0 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.1 -0.7 +0.0 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.2 -1.0 -0.2 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.4 -0.9 +0.2 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.4 -0.7 -0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.4 -1.2 +0.1 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.1 -0.9 +0.1 -0.5
smsa no antibiotic control SMSA no antibiotic control N.D. +0.2 -1.1 +0.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.1 -0.7 +0.1 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +0.2 -1.1 +0.1 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.4 -0.4 -0.3 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 -0.5 -0.2 +0.5
m63_quarter_strength M63_quarter_strength N.D. -0.2 +0.4 -0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.6 -0.1 -0.2 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.4 -0.0 +0.4 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.4 +0.1 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.8 +0.4 -0.1 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.3 +0.1 +1.0
remove
RPSI07_RS14055
plot
remove
RPSI07_RS14060
plot
remove
RPSI07_RS14065
remove
RPSI07_RS14070
plot
remove
RPSI07_RS14075
plot