Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS14035 and RPSI07_RS14040 are separated by 49 nucleotidesRPSI07_RS14040 and RPSI07_RS14045 are separated by 166 nucleotidesRPSI07_RS14045 and RPSI07_RS14050 are separated by 292 nucleotidesRPSI07_RS14050 and RPSI07_RS14055 are separated by 111 nucleotides RPSI07_RS14035: RPSI07_RS14035 - class 1 fructose-bisphosphatase, at 1,336,623 to 1,337,639 _RS14035 RPSI07_RS14040: RPSI07_RS14040 - aminopeptidase N, at 1,337,689 to 1,340,406 _RS14040 RPSI07_RS14045: RPSI07_RS14045 - DUF4136 domain-containing protein, at 1,340,573 to 1,341,214 _RS14045 RPSI07_RS14050: RPSI07_RS14050 - NADP-dependent malic enzyme, at 1,341,507 to 1,343,834 _RS14050 RPSI07_RS14055: RPSI07_RS14055 - porin, at 1,343,946 to 1,345,013 _RS14055
Group Condition RPSI07_RS14035 RPSI07_RS14040 RPSI07_RS14045 RPSI07_RS14050 RPSI07_RS14055
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 -0.4 -1.3 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. -0.4 +0.0 -1.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.2 -0.8 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. -0.1 -0.1 -1.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.4 -0.2 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 -0.1 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.5 -0.2 -1.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.4 +0.0 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.1 -0.1 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.1 -0.3 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. +0.1 +0.1 -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 +0.2 -0.7 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 +0.2 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.2 -0.4 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.1 +0.1 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 +0.0 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.3 +0.1 -0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.4 +0.2 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. +0.1 -0.4 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.1 -0.4 +0.3 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.5 +0.3 -0.8 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.3 +0.2 -0.4 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 +0.9 -0.7 N.D.
m63_quarter_strength M63_quarter_strength N.D. +0.3 -0.3 +0.7 N.D.
m63_quarter_strength M63_quarter_strength N.D. +0.2 +0.3 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. +0.3 +0.2 +0.2 N.D.
m63_quarter_strength M63_quarter_strength N.D. +0.7 +0.3 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +1.7 -0.3 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +1.6 +0.1 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +1.9 +0.1 +0.5 N.D.
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