Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS13460 and RPSI07_RS13465 overlap by 10 nucleotidesRPSI07_RS13465 and RPSI07_RS13470 are separated by 85 nucleotidesRPSI07_RS13470 and RPSI07_RS13475 are separated by 82 nucleotidesRPSI07_RS13475 and RPSI07_RS13480 are separated by 4 nucleotides RPSI07_RS13460: RPSI07_RS13460 - hypothetical protein, at 1,210,098 to 1,210,895 _RS13460 RPSI07_RS13465: RPSI07_RS13465 - homoserine kinase, at 1,210,886 to 1,211,890 _RS13465 RPSI07_RS13470: RPSI07_RS13470 - membrane protein, at 1,211,976 to 1,212,404 _RS13470 RPSI07_RS13475: RPSI07_RS13475 - TIGR00730 family Rossman fold protein, at 1,212,487 to 1,213,449 _RS13475 RPSI07_RS13480: RPSI07_RS13480 - DNA polymerase I, at 1,213,454 to 1,216,288 _RS13480
Group Condition RPSI07_RS13460 RPSI07_RS13465 RPSI07_RS13470 RPSI07_RS13475 RPSI07_RS13480
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 N.D. N.D. -4.8 -2.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 N.D. N.D. -4.7 -2.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 N.D. N.D. -4.5 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 N.D. N.D. -2.5 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 N.D. N.D. -2.6 -1.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.5 N.D. N.D. -0.7 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 N.D. N.D. -0.5 -1.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 N.D. N.D. -1.6 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 N.D. N.D. -1.4 -1.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 N.D. N.D. -1.7 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 N.D. N.D. -1.8 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 N.D. N.D. +0.2 -2.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.2 N.D. N.D. -0.1 -1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 N.D. N.D. -1.1 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.4 N.D. N.D. -0.3 -1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. N.D. -0.1 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. N.D. +0.0 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. -0.8 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 N.D. N.D. -0.5 -1.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.6 N.D. N.D. -0.9 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.3 N.D. N.D. -0.6 -1.1
smsa no antibiotic control SMSA no antibiotic control -0.5 N.D. N.D. +0.3 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 N.D. N.D. -0.2 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.6 N.D. N.D. +0.6 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 N.D. N.D. +0.8 -1.5
cpg no stress control CPG no stress control +0.5 N.D. N.D. -0.4 -0.9
stress SMSA with Ralstonia_antibiotic_mix +0.2 N.D. N.D. +0.4 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.5 N.D. N.D. +0.6 -0.7
m63_quarter_strength M63_quarter_strength +0.2 N.D. N.D. +1.0 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.3 N.D. N.D. -0.3 +1.5
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