Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS13440 and RPSI07_RS13445 are separated by 93 nucleotidesRPSI07_RS13445 and RPSI07_RS13450 are separated by 39 nucleotidesRPSI07_RS13450 and RPSI07_RS13455 are separated by 143 nucleotidesRPSI07_RS13455 and RPSI07_RS13460 are separated by 34 nucleotides RPSI07_RS13440: RPSI07_RS13440 - hypothetical protein, at 1,202,625 to 1,203,620 _RS13440 RPSI07_RS13445: RPSI07_RS13445 - UTP--glucose-1-phosphate uridylyltransferase, at 1,203,714 to 1,204,586 _RS13445 RPSI07_RS13450: RPSI07_RS13450 - valine--tRNA ligase, at 1,204,626 to 1,207,532 _RS13450 RPSI07_RS13455: RPSI07_RS13455 - DNA-dependent helicase, at 1,207,676 to 1,210,063 _RS13455 RPSI07_RS13460: RPSI07_RS13460 - hypothetical protein, at 1,210,098 to 1,210,895 _RS13460
Group Condition RPSI07_RS13440 RPSI07_RS13445 RPSI07_RS13450 RPSI07_RS13455 RPSI07_RS13460
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.0 -6.3 N.D. N.D. +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -1.5 N.D. N.D. -1.5
cpg CPG -0.1 -2.7 N.D. N.D. +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -1.9 N.D. N.D. -0.3
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 -2.5 N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.0 -1.5 N.D. N.D. -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -1.6 N.D. N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.1 -1.6 N.D. N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -1.5 N.D. N.D. -0.5
m63_quarter_strength M63_quarter_strength -0.1 -1.7 N.D. N.D. -0.1
cpg no stress control CPG no stress control -0.5 -1.6 N.D. N.D. +0.2
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.2 -2.1 N.D. N.D. +0.1
smsa no antibiotic control SMSA no antibiotic control +0.1 -1.3 N.D. N.D. -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 -1.7 N.D. N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 -2.1 N.D. N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 -1.7 N.D. N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -1.0 N.D. N.D. -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.3 -1.7 N.D. N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 -1.5 N.D. N.D. -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 -1.6 N.D. N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.8 N.D. N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -1.7 N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 -1.8 N.D. N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix +0.4 -2.0 N.D. N.D. +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.0 -1.6 N.D. N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.6 -1.1 N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 -1.2 N.D. N.D. -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -1.5 N.D. N.D. +0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 -1.6 N.D. N.D. +0.6
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 +1.2 N.D. N.D. -0.7
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RPSI07_RS13440
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RPSI07_RS13445
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RPSI07_RS13455
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RPSI07_RS13460
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