Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS13430 and RPSI07_RS13435 are separated by 351 nucleotidesRPSI07_RS13435 and RPSI07_RS13440 are separated by 439 nucleotidesRPSI07_RS13440 and RPSI07_RS13445 are separated by 93 nucleotidesRPSI07_RS13445 and RPSI07_RS13450 are separated by 39 nucleotides RPSI07_RS13430: RPSI07_RS13430 - hypothetical protein, at 1,201,325 to 1,201,615 _RS13430 RPSI07_RS13435: RPSI07_RS13435 - translation initiation factor IF-1, at 1,201,967 to 1,202,185 _RS13435 RPSI07_RS13440: RPSI07_RS13440 - hypothetical protein, at 1,202,625 to 1,203,620 _RS13440 RPSI07_RS13445: RPSI07_RS13445 - UTP--glucose-1-phosphate uridylyltransferase, at 1,203,714 to 1,204,586 _RS13445 RPSI07_RS13450: RPSI07_RS13450 - valine--tRNA ligase, at 1,204,626 to 1,207,532 _RS13450
Group Condition RPSI07_RS13430 RPSI07_RS13435 RPSI07_RS13440 RPSI07_RS13445 RPSI07_RS13450
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.2 N.D. -0.0 -6.3 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 N.D. -0.1 -2.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 N.D. -0.0 -1.7 N.D.
cpg no stress control CPG no stress control -0.2 N.D. -0.5 -1.6 N.D.
cpg CPG +0.4 N.D. -0.1 -2.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 N.D. -0.3 -1.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 N.D. +0.1 -1.8 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.1 -1.9 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 N.D. +0.1 -1.6 N.D.
m63_quarter_strength M63_quarter_strength -0.0 N.D. -0.1 -1.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 N.D. -0.6 -1.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.3 N.D. +0.3 -1.7 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.2 N.D. +0.2 -2.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.0 N.D. -0.1 -1.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.5 N.D. -0.1 -2.1 N.D.
smsa no antibiotic control SMSA no antibiotic control -0.3 N.D. +0.1 -1.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.1 N.D. +0.4 -2.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. -0.1 -1.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 N.D. +0.1 -1.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. -0.0 -1.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.5 N.D. -0.0 -1.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 N.D. -0.1 -1.5 N.D.
m63_quarter_strength M63_quarter_strength +0.5 N.D. +0.1 -1.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.9 N.D. -0.0 -1.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. +0.3 -1.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.0 N.D. +0.3 -1.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +1.0 N.D. +0.2 -1.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 N.D. +0.3 -1.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 N.D. +0.4 -0.9 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 N.D. +0.4 +1.2 N.D.
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RPSI07_RS13430
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RPSI07_RS13435
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RPSI07_RS13445
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RPSI07_RS13450
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