Fitness for 5 genes in Ralstonia solanacearum PSI07

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RPSI07_RS13105	RPSI07_RS13110	RPSI07_RS13115	RPSI07_RS13120	RPSI07_RS13125
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	-3.8	-3.7	-0.5	-0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	-3.1	-3.0	-0.2	-0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	N.D.	-3.8	-4.2	+1.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	-1.7	-1.6	-1.0	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	-2.1	-2.3	-0.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	-2.1	-2.2	+0.7	+0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.6	-1.0	-1.7	+0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.5	-0.4	-1.6	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	-1.3	-1.1	-0.1	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	-1.2	-1.6	+0.0	+0.2
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.9	-1.1	-0.7	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	-0.6	-0.4	-1.2	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.6	-0.3	-1.2	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	+0.1	-1.6	-0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	-0.9	-0.8	-0.8	+0.1
cpg	CPG	N.D.	-0.5	-0.7	-0.9	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	-1.1	-1.1	+0.1	-0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.3	+0.0	-1.3	-0.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	+0.1	-2.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	-0.9	-0.7	+0.2	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	N.D.	-0.9	-0.7	-0.0	+0.3
xylem sap	Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap	N.D.	-0.9	-0.7	+0.2	+0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	N.D.	-1.1	-1.4	+1.0	+0.4
smsa no antibiotic control	SMSA no antibiotic control	N.D.	+0.6	+0.9	-1.1	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	-0.4	-0.6	+1.0	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	+0.4	+1.2	-0.4	-0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	+0.4	+0.4	+0.9	-0.7
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	+0.7	+0.8	+0.2	-0.1
m63_quarter_strength	M63_quarter_strength	N.D.	+0.4	+0.5	+1.2	-0.0
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	N.D.	+0.3	+0.5	+1.7	+0.4