Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS12415 and RPSI07_RS12420 are separated by 190 nucleotidesRPSI07_RS12420 and RPSI07_RS12425 are separated by 614 nucleotidesRPSI07_RS12425 and RPSI07_RS12430 are separated by 178 nucleotidesRPSI07_RS12430 and RPSI07_RS12435 are separated by 14 nucleotides RPSI07_RS12415: RPSI07_RS12415 - ser/threonine protein phosphatase, at 978,761 to 980,272 _RS12415 RPSI07_RS12420: RPSI07_RS12420 - hypothetical protein, at 980,463 to 980,666 _RS12420 RPSI07_RS12425: RPSI07_RS12425 - NADP-dependent isocitrate dehydrogenase, at 981,281 to 982,531 _RS12425 RPSI07_RS12430: RPSI07_RS12430 - DUF4102 domain-containing protein, at 982,710 to 983,957 _RS12430 RPSI07_RS12435: RPSI07_RS12435 - hypothetical protein, at 983,972 to 984,442 _RS12435
Group Condition RPSI07_RS12415 RPSI07_RS12420 RPSI07_RS12425 RPSI07_RS12430 RPSI07_RS12435
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 N.D. N.D. -0.2 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. N.D. -0.3 +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 N.D. N.D. -0.1 -0.4
cpg no stress control CPG no stress control +0.1 N.D. N.D. -0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 N.D. N.D. -0.1 -0.2
cpg no stress control CPG no stress control -0.3 N.D. N.D. -0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.4 N.D. N.D. -0.0 -0.2
m63_quarter_strength M63_quarter_strength -0.2 N.D. N.D. -0.0 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. N.D. -0.2 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 N.D. N.D. -0.0 -0.3
smsa no antibiotic control SMSA no antibiotic control -0.6 N.D. N.D. -0.0 +0.1
cpg CPG -0.1 N.D. N.D. +0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 N.D. N.D. -0.2 +0.5
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 N.D. N.D. +0.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 N.D. N.D. +0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix -0.5 N.D. N.D. +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 N.D. N.D. -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 N.D. N.D. -0.0 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.3 N.D. N.D. +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.4 N.D. N.D. -0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. -0.2 +0.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.1 N.D. N.D. +0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 N.D. N.D. -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.5 N.D. N.D. -0.2 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 N.D. N.D. -0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.4 N.D. N.D. +0.2 +0.7
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 N.D. N.D. +0.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix +0.3 N.D. N.D. -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.0 N.D. N.D. +0.2 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 N.D. N.D. +0.3 +0.4
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RPSI07_RS12415
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RPSI07_RS12420
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RPSI07_RS12430
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RPSI07_RS12435
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