Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS12320 and RPSI07_RS12325 are separated by 181 nucleotidesRPSI07_RS12325 and RPSI07_RS12330 are separated by 95 nucleotidesRPSI07_RS12330 and RPSI07_RS12335 are separated by 18 nucleotidesRPSI07_RS12335 and RPSI07_RS12340 are separated by 660 nucleotides RPSI07_RS12320: RPSI07_RS12320 - hypothetical protein, at 959,629 to 960,021 _RS12320 RPSI07_RS12325: RPSI07_RS12325 - signal peptidase, at 960,203 to 961,219 _RS12325 RPSI07_RS12330: RPSI07_RS12330 - hypothetical protein, at 961,315 to 961,587 _RS12330 RPSI07_RS12335: RPSI07_RS12335 - type II toxin-antitoxin system HipA family toxin, at 961,606 to 962,931 _RS12335 RPSI07_RS12340: RPSI07_RS12340 - EamA/RhaT family transporter, at 963,592 to 964,524 _RS12340
Group Condition RPSI07_RS12320 RPSI07_RS12325 RPSI07_RS12330 RPSI07_RS12335 RPSI07_RS12340
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 +0.6 -3.6 +3.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.0 +0.1 -1.4 +1.7 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.1 +0.2 -0.9 +1.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.4 +0.1 -1.1 +1.5 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -1.0 +0.2 +0.7 +1.5 +0.1
smsa no antibiotic control SMSA no antibiotic control +0.5 +0.1 -0.8 +1.7 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 +0.4 -0.6 +1.5 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.6 -1.8 +3.3 +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -1.0 +3.4 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.1 -1.1 +3.5 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.8 +3.6 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.1 -0.6 +3.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.1 +0.1 +2.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.2 -1.1 +3.4 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.1 +0.1 -0.5 +2.2 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.3 -1.2 +3.7 +0.2
m63_quarter_strength M63_quarter_strength -0.0 -0.1 -0.9 +3.7 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.0 -0.2 +3.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 -0.5 +3.2 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 +0.3 +0.4 +2.1 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.1 -0.1 +3.4 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.1 -0.4 +3.6 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -0.2 +3.7 +0.1
m63_quarter_strength M63_quarter_strength -0.3 +0.1 -0.9 +4.6 +0.1
m63_quarter_strength M63_quarter_strength +0.2 -0.2 -0.3 +4.0 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.1 +0.0 +3.2 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.2 +0.3 +3.0 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.5 +0.3 -0.8 +3.7 +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 +0.7 -1.0 +5.3 +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.3 +0.5 +5.9 +0.6
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RPSI07_RS12320
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RPSI07_RS12325
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RPSI07_RS12330		 remove
RPSI07_RS12335
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RPSI07_RS12340
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