Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS12135 and RPSI07_RS12140 are separated by 106 nucleotidesRPSI07_RS12140 and RPSI07_RS12145 are separated by 47 nucleotidesRPSI07_RS12145 and RPSI07_RS12150 are separated by 151 nucleotidesRPSI07_RS12150 and RPSI07_RS12155 are separated by 58 nucleotides RPSI07_RS12135: RPSI07_RS12135 - UDP-N-acetylmuramate dehydrogenase, at 924,028 to 925,056 _RS12135 RPSI07_RS12140: RPSI07_RS12140 - YajQ family cyclic di-GMP-binding protein, at 925,163 to 925,648 _RS12140 RPSI07_RS12145: RPSI07_RS12145 - nucleoside hydrolase, at 925,696 to 926,751 _RS12145 RPSI07_RS12150: RPSI07_RS12150 - glycerol-3-phosphate 1-O-acyltransferase PlsY, at 926,903 to 927,526 _RS12150 RPSI07_RS12155: RPSI07_RS12155 - Cys-tRNA(Pro) deacylase, at 927,585 to 928,076 _RS12155
Group Condition RPSI07_RS12135 RPSI07_RS12140 RPSI07_RS12145 RPSI07_RS12150 RPSI07_RS12155
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.6 N.D. +0.0
cpg CPG N.D. N.D. -0.4 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -0.3 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. -0.3 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. -0.2 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -0.4 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.3 N.D. +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.4 N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. -0.3 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +0.2 N.D. -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 N.D. -0.3
cpg CPG N.D. N.D. -0.4 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. -0.3 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. +0.2 N.D. -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. -0.2 N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. +0.2 N.D. -0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 N.D. +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 N.D. +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -0.2 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.3 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.2 N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. +0.3 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.4 N.D. -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.0 N.D. +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.0 N.D. +0.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. +0.1 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.4 N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.4 N.D. +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. +0.5 N.D. +0.1
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RPSI07_RS12135
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