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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS12075 and RPSI07_RS12080 are separated by 53 nucleotides
RPSI07_RS12080 and RPSI07_RS12085 are separated by 343 nucleotides
RPSI07_RS12085 and RPSI07_RS12090 are separated by 226 nucleotides
RPSI07_RS12090 and RPSI07_RS12095 are separated by 3 nucleotides
RPSI07_RS12075: RPSI07_RS12075 - MCE family protein, at 911,721 to 913,397
_RS12075
RPSI07_RS12080: RPSI07_RS12080 - DUF3313 domain-containing protein, at 913,451 to 914,113
_RS12080
RPSI07_RS12085: RPSI07_RS12085 - TetR/AcrR family transcriptional regulator, at 914,457 to 915,086
_RS12085
RPSI07_RS12090: RPSI07_RS12090 - membrane protein, at 915,313 to 915,969
_RS12090
RPSI07_RS12095: RPSI07_RS12095 - transglutaminase, at 915,973 to 916,818
_RS12095
Group
Condition
RPSI07
_RS12075
RPSI07
_RS12080
RPSI07
_RS12085
RPSI07
_RS12090
RPSI07
_RS12095
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.1
-0.2
-5.9
-3.6
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.1
-0.1
-5.6
-3.6
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.1
+0.0
-4.8
-4.2
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
-0.0
-6.0
-2.7
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
-0.1
-5.2
-2.9
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.0
-0.1
-4.6
-3.8
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.2
+0.2
-4.0
-3.4
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.0
+0.2
-3.0
-4.5
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.2
+0.1
-4.0
-3.4
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.1
-0.1
-1.5
-4.2
-0.1
stress
SMSA with Ralstonia_antibiotic_mix
+0.1
-0.1
-2.0
-3.1
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.1
-0.2
-2.0
-2.9
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.1
-0.0
-2.3
-3.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.1
+0.2
-0.7
-4.4
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.1
+0.1
-1.2
-3.4
-0.2
stress
SMSA with Ralstonia_antibiotic_mix
+0.2
+0.1
-0.8
-4.3
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.0
+0.1
-1.0
-3.5
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.0
-0.0
-1.3
-3.2
+0.0
stress
SMSA with Ralstonia_antibiotic_mix
-0.0
-0.1
-1.5
-2.7
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.1
+0.1
-0.2
-4.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.0
-0.1
-1.8
-2.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.1
+0.0
-2.5
-1.6
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.2
+0.0
-2.5
-0.6
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.0
+0.1
-0.7
-2.9
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
+0.1
+0.7
-2.8
-0.1
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.3
-0.1
+0.7
-2.3
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.1
-0.1
+0.7
-2.2
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
+0.4
+0.4
-2.7
+0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
+0.1
+1.1
-2.3
-0.1
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.2
+0.6
+0.8
-1.6
+0.8
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