Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS12055 and RPSI07_RS12060 are separated by 101 nucleotidesRPSI07_RS12060 and RPSI07_RS12065 overlap by 4 nucleotidesRPSI07_RS12065 and RPSI07_RS12070 are separated by 7 nucleotidesRPSI07_RS12070 and RPSI07_RS12075 are separated by 60 nucleotides RPSI07_RS12055: RPSI07_RS12055 - cysteine methyltransferase, at 907,621 to 908,136 _RS12055 RPSI07_RS12060: RPSI07_RS12060 - N-acetyltransferase, at 908,238 to 908,771 _RS12060 RPSI07_RS12065: RPSI07_RS12065 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 908,768 to 909,739 _RS12065 RPSI07_RS12070: RPSI07_RS12070 - DNA mismatch repair endonuclease MutL, at 909,747 to 911,660 _RS12070 RPSI07_RS12075: RPSI07_RS12075 - MCE family protein, at 911,721 to 913,397 _RS12075
Group Condition RPSI07_RS12055 RPSI07_RS12060 RPSI07_RS12065 RPSI07_RS12070 RPSI07_RS12075
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.9 -3.2 -0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.9 -3.2 -0.1 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.0 +1.1 -0.7 -0.0 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.1 -0.6 -1.0 +0.1 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.9 +0.1 -1.4 -0.3 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.1 -2.1 +0.1 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.4 -2.5 +0.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 -1.7 -0.7 -0.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.2 +0.0 -1.1 -0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.3 -1.9 -0.7 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.6 -2.7 +0.2 -0.2
m63_quarter_strength M63_quarter_strength -1.2 -0.7 -0.3 +0.1 +0.3
stress SMSA with Ralstonia_antibiotic_mix -1.1 -0.2 -0.6 -0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +0.3 -2.1 +0.2 +0.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.6 +0.1 -1.5 +0.4 +0.1
cpg no stress control CPG no stress control +0.2 +0.2 -1.4 -0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 -1.7 +0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.0 +0.2 -0.6 +0.3 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.2 +0.4 -0.5 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.5 -0.1 -1.3 -0.2 +0.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.6 +0.3 -1.7 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 +0.0 -1.4 -0.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.3 -1.2 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.7 -0.1 -0.8 -0.1 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 +0.3 -1.1 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +1.0 +0.4 -1.0 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.4 -0.1 -0.3 -0.3 -0.2
cpg CPG -1.4 +0.6 +1.3 +0.1 -0.1
m63_quarter_strength M63_quarter_strength -0.9 +0.7 +0.8 -0.1 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.9 +0.7 +0.8 +0.2
remove
RPSI07_RS12055
plot		 remove
RPSI07_RS12060
plot		 remove
RPSI07_RS12065		 remove
RPSI07_RS12070
plot		 remove
RPSI07_RS12075
plot