Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS11055 and RPSI07_RS11060 are separated by 44 nucleotidesRPSI07_RS11060 and RPSI07_RS11065 are separated by 247 nucleotidesRPSI07_RS11065 and RPSI07_RS11070 are separated by 175 nucleotidesRPSI07_RS11070 and RPSI07_RS11075 are separated by 26 nucleotides RPSI07_RS11055: RPSI07_RS11055 - type II secretion system F family protein, at 681,174 to 682,439 _RS11055 RPSI07_RS11060: RPSI07_RS11060 - type IV-A pilus assembly ATPase PilB, at 682,484 to 684,211 _RS11060 RPSI07_RS11065: RPSI07_RS11065 - HlyC/CorC family transporter, at 684,459 to 685,736 _RS11065 RPSI07_RS11070: RPSI07_RS11070 - tRNA-Pro, at 685,912 to 685,988 _RS11070 RPSI07_RS11075: RPSI07_RS11075 - octaprenyl diphosphate synthase, at 686,015 to 686,983 _RS11075
Group Condition RPSI07_RS11055 RPSI07_RS11060 RPSI07_RS11065 RPSI07_RS11070 RPSI07_RS11075
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 -0.3 +0.2 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.3 -0.0 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 -0.5 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.4 +0.2 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 -0.4 +0.3 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 -0.4 +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.2 +0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.6 +0.2 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.7 +0.3 -0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.6 +0.4 +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.7 +0.3 +0.1 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control +0.8 +0.3 +0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.6 +0.2 +0.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.6 +0.5 +0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 +0.7 -0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.5 +0.8 +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.6 +0.6 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 +0.8 +0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.7 +0.7 +0.2 N.D. N.D.
cpg CPG +0.8 +0.8 -0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.0 +0.7 +0.0 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.5 +0.9 +0.4 N.D. N.D.
cpg CPG +0.8 +0.8 +0.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.0 +1.0 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 +1.1 +0.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +1.4 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +1.6 +0.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.2 +1.7 -0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +1.3 +1.0 +0.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.4 +1.8 -0.1 N.D. N.D.
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