Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS11030 and RPSI07_RS11035 overlap by 4 nucleotidesRPSI07_RS11035 and RPSI07_RS11040 are separated by 11 nucleotidesRPSI07_RS11040 and RPSI07_RS11045 are separated by 117 nucleotidesRPSI07_RS11045 and RPSI07_RS11050 are separated by 12 nucleotides RPSI07_RS11030: RPSI07_RS11030 - NUDIX domain-containing protein, at 678,105 to 678,563 _RS11030 RPSI07_RS11035: RPSI07_RS11035 - DNA gyrase inhibitor YacG, at 678,560 to 678,775 _RS11035 RPSI07_RS11040: RPSI07_RS11040 - cell division protein ZapD, at 678,787 to 679,545 _RS11040 RPSI07_RS11045: RPSI07_RS11045 - dephospho-CoA kinase, at 679,663 to 680,277 _RS11045 RPSI07_RS11050: RPSI07_RS11050 - prepilin peptidase, at 680,290 to 681,171 _RS11050
Group Condition RPSI07_RS11030 RPSI07_RS11035 RPSI07_RS11040 RPSI07_RS11045 RPSI07_RS11050
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.7 N.D. -0.8 N.D. -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.4 N.D. -0.1 N.D. -0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.8 N.D. -0.3 N.D. -1.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.8 N.D. -0.6 N.D. -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.0 N.D. -0.6 N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.8 N.D. -0.2 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.2 N.D. -1.0 N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 N.D. -1.2 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. -1.4 N.D. +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 N.D. -1.1 N.D. +0.4
cpg no stress control CPG no stress control -1.1 N.D. -0.9 N.D. +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.6 N.D. -0.9 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.5 N.D. -1.4 N.D. +0.9
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 N.D. -0.6 N.D. -1.0
smsa no antibiotic control SMSA no antibiotic control -0.5 N.D. -1.2 N.D. +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 N.D. -0.5 N.D. +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 N.D. -1.3 N.D. +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 N.D. -1.0 N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 N.D. -0.3 N.D. -1.0
stress SMSA with Ralstonia_antibiotic_mix +0.2 N.D. -1.1 N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.0 N.D. +0.2 N.D. +0.5
cpg CPG -1.3 N.D. -0.2 N.D. +1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 N.D. -0.6 N.D. +0.8
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 N.D. +0.0 N.D. +1.0
cpg CPG +0.4 N.D. -0.4 N.D. +1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +1.2 N.D. +0.3 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix +2.0 N.D. +0.3 N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 N.D. +0.2 N.D. +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. +0.4 N.D. +1.5
m63_quarter_strength M63_quarter_strength +2.2 N.D. -0.2 N.D. -0.1
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