Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10750 and RPSI07_RS10755 are separated by 17 nucleotidesRPSI07_RS10755 and RPSI07_RS10760 are separated by 366 nucleotidesRPSI07_RS10760 and RPSI07_RS10765 overlap by 4 nucleotidesRPSI07_RS10765 and RPSI07_RS10770 are separated by 134 nucleotides RPSI07_RS10750: RPSI07_RS10750 - type 1 glutamine amidotransferase, at 610,749 to 611,318 _RS10750 RPSI07_RS10755: RPSI07_RS10755 - anthranilate synthase component I, at 611,336 to 612,868 _RS10755 RPSI07_RS10760: RPSI07_RS10760 - phosphoglycolate phosphatase, at 613,235 to 613,975 _RS10760 RPSI07_RS10765: RPSI07_RS10765 - ribulose-phosphate 3-epimerase, at 613,972 to 614,700 _RS10765 RPSI07_RS10770: RPSI07_RS10770 - Co2+/Mg2+ efflux protein ApaG, at 614,835 to 615,209 _RS10770
Group Condition RPSI07_RS10750 RPSI07_RS10755 RPSI07_RS10760 RPSI07_RS10765 RPSI07_RS10770
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.7 N.D. -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.2 N.D. -0.5
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. +0.2 N.D. -0.8
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. +0.0 N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 N.D. -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. +0.1 N.D. -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. +0.1 N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. +0.2 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.2 N.D. +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.2 N.D. -0.2
cpg no stress control CPG no stress control N.D. N.D. +0.2 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. +0.3 N.D. -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.2 N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.2 N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. +0.4 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. +0.4 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. -0.1 N.D. +0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. -0.1 N.D. +0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. +0.4 N.D. -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. +0.4 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. +0.2 N.D. +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. +0.5 N.D. -0.0
cpg CPG N.D. N.D. +0.1 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. +0.6 N.D. -0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. -0.1 N.D. +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. +0.0 N.D. +0.6
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. -0.4 N.D. +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +0.1 N.D. +1.0
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