Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10715 and RPSI07_RS10720 overlap by 4 nucleotidesRPSI07_RS10720 and RPSI07_RS10725 are separated by 92 nucleotidesRPSI07_RS10725 and RPSI07_RS10730 overlap by 4 nucleotidesRPSI07_RS10730 and RPSI07_RS10735 are separated by 3 nucleotides RPSI07_RS10715: RPSI07_RS10715 - hypothetical protein, at 606,141 to 606,437 _RS10715 RPSI07_RS10720: RPSI07_RS10720 - hypothetical protein, at 606,434 to 606,891 _RS10720 RPSI07_RS10725: RPSI07_RS10725 - uracil-DNA glycosylase, at 606,984 to 607,778 _RS10725 RPSI07_RS10730: RPSI07_RS10730 - CYTH domain-containing protein, at 607,775 to 608,446 _RS10730 RPSI07_RS10735: RPSI07_RS10735 - indole-3-glycerol phosphate synthase TrpC, at 608,450 to 609,253 _RS10735
Group Condition RPSI07_RS10715 RPSI07_RS10720 RPSI07_RS10725 RPSI07_RS10730 RPSI07_RS10735
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.9 N.D. -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. -0.3 N.D. -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.4 N.D. -0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.2 N.D. -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 N.D. -0.5 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 N.D. -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -0.2 N.D. -0.5 N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. +0.1 N.D. -0.7 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.3 N.D. -0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 N.D. -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 N.D. -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.4 N.D. +0.4 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.7 N.D. -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.5 N.D. -0.1 N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. +0.4 N.D. +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.0 N.D. +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +0.3 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.1 N.D. +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.3 N.D. +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. +0.4 N.D. +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.0 N.D. +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. +0.2 N.D. +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. +0.2 N.D. +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +0.1 N.D. +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. +0.1 N.D. +0.6 N.D.
cpg no stress control CPG no stress control N.D. +0.1 N.D. +0.6 N.D.
cpg CPG N.D. +0.3 N.D. +0.5 N.D.
m63_quarter_strength M63_quarter_strength N.D. +0.5 N.D. +0.2 N.D.
cpg no stress control CPG no stress control N.D. +0.4 N.D. +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +0.4 N.D. +0.7 N.D.
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RPSI07_RS10715
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RPSI07_RS10720
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RPSI07_RS10735
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